RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 MAK16Q9BXY0 300 aaKnown RBP12.97□□□□□ -0.33
ACTN1-207ENST00000553290 PHPT1Q9NRX4 125 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-207ENST00000553290 DDX56Q9NY93 547 aaKnown RBP12.97□□□□□ -0.33
ACTN1-207ENST00000553290 PADI4Q9UM07 663 aa12.97□□□□□ -0.33
ACTN1-207ENST00000553290 RAXQ9Y2V3 346 aa12.97□□□□□ -0.33
ACTN1-207ENST00000553290 URB1O60287 2271 aaKnown RBP12.96□□□□□ -0.33
ACTN1-207ENST00000553290 ASXL3Q9C0F0 2248 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 TMEM202A6NGA9 273 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 NPIPB15A6NHN6 443 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-207ENST00000553290 C3orf70A6NLC5 250 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-207ENST00000553290 PDHA1P08559 390 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 MYCLP1P12525 358 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-207ENST00000553290 ZFXP17010 805 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-207ENST00000553290 ZNF30P17039 623 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 EPHB1P54762 984 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 DSC2Q02487 901 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 PPIDQ08752 370 aaKnown RBP12.96□□□□□ -0.33
ACTN1-207ENST00000553290 SLC9A4Q6AI14 798 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 HSD11B1LQ7Z5J1 315 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 RHOT1Q8IXI2 618 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 PLD5Q8N7P1 536 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 ARL10Q8N8L6 244 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 TC2NQ8N9U0 490 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 OR1E3Q8WZA6 343 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 GRAMD1AQ96CP6 724 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 FGF22Q9HCT0 170 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 DNPEPQ9ULA0 475 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 GPSM3Q9Y4H4 160 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 TTLL3Q9Y4R7 772 aa12.96□□□□□ -0.33
ACTN1-207ENST00000553290 ZFHX4Q86UP3 3567 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 A0A0J9YYE9 177 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 APOL1O14791 398 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 SPOPO43791 374 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 CSO75390 466 aaKnown RBP12.95□□□□□ -0.34
ACTN1-207ENST00000553290 TRBC1P01850 177 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 KRT1P04264 644 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 HLA-DQB2P05538 268 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 CELA2BP08218 269 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-207ENST00000553290 CTPS1P17812 591 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 TGM2P21980 687 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 LHCGRP22888 699 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 TEAD1P28347 426 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 ETV3P41162 512 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 MAGEA1P43355 309 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 HADHBP55084 474 aaKnown RBP12.95□□□□□ -0.34
ACTN1-207ENST00000553290 RPL26P61254 145 aaKnown RBP12.95□□□□□ -0.34
ACTN1-207ENST00000553290 DPTQ07507 201 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 Q6ZVL8 140 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 TECPR1Q7Z6L1 1165 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 TSPAN33Q86UF1 283 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 OR6C4Q8NGE1 309 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 ARRDC2Q8TBH0 407 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 PDXPQ96GD0 296 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 LGR4Q9BXB1 951 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 TDRD1Q9BXT4 1180 aaKnown RBP12.95□□□□□ -0.34
ACTN1-207ENST00000553290 TEX101Q9BY14 249 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 GULP1Q9UBP9 304 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 MOSPD1Q9UJG1 213 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 RPL26L1Q9UNX3 145 aaKnown RBP12.95□□□□□ -0.34
ACTN1-207ENST00000553290 GPR34Q9UPC5 381 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 HEY1Q9Y5J3 304 aa12.95□□□□□ -0.34
ACTN1-207ENST00000553290 RP1P56715 2156 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 PRSS38A1L453 326 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 TCEA3O75764 348 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 LCA5LO95447 670 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 JCHAINP01591 159 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 COMTP21964 271 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 NOP2P46087 812 aaKnown RBP12.94□□□□□ -0.34
ACTN1-207ENST00000553290 IFI35P80217 286 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-207ENST00000553290 CDK3Q00526 305 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 PTSQ03393 145 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 NIPAL4Q0D2K0 466 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 IHHQ14623 411 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 PDK1Q15118 436 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 TCEA2Q15560 299 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 PERM1Q5SV97 790 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 LRRC66Q68CR7 880 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 CRTC1Q6UUV9 634 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 RBM44Q6ZP01 1051 aaKnown RBP12.94□□□□□ -0.34
ACTN1-207ENST00000553290 NYAP1Q6ZVC0 841 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 BZW1Q7L1Q6 419 aaKnown RBP12.94□□□□□ -0.34
ACTN1-207ENST00000553290 TAF8Q7Z7C8 310 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 NLRP8Q86W28 1048 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 HEATR4Q86WZ0 1026 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 RFX6Q8HWS3 928 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 RAVER1Q8IY67 606 aaKnown RBP12.94□□□□□ -0.34
ACTN1-207ENST00000553290 CCDC170Q8IYT3 715 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 PELI3Q8N2H9 469 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.94□□□□□ -0.34
ACTN1-207ENST00000553290 KYQ8NBH2 561 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 LRRN4Q8WUT4 740 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 LGMNQ99538 433 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 CCDC3Q9BQI4 270 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 BRD8Q9H0E9 1235 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 PCDH9Q9HC56 1237 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 CYP4F12Q9HCS2 524 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 LUC7LQ9NQ29 371 aaKnown RBP12.94□□□□□ -0.34
ACTN1-207ENST00000553290 MRPL40Q9NQ50 206 aaKnown RBP12.94□□□□□ -0.34
ACTN1-207ENST00000553290 SIRPGQ9P1W8 387 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 LHX6Q9UPM6 363 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms