RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 SCRN2Q96FV2 425 aa15.91■□□□□ 0.14
CDK4-215ENST00000553237 WDR26Q9H7D7 661 aa15.91■□□□□ 0.14
CDK4-215ENST00000553237 SUDS3Q9H7L9 328 aaPredicted RBP15.91■□□□□ 0.14
CDK4-215ENST00000553237 SYNDIG1Q9H7V2 258 aa15.91■□□□□ 0.14
CDK4-215ENST00000553237 CYP4F12Q9HCS2 524 aa15.91■□□□□ 0.14
CDK4-215ENST00000553237 ADAMTS20P59510 1910 aa15.91■□□□□ 0.14
CDK4-215ENST00000553237 A0A087WV48 116 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 GOLGA6CA6NDK9 693 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 GOLGA6BA6NDN3 693 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 HOXC4P09017 264 aaPredicted RBP15.9■□□□□ 0.14
CDK4-215ENST00000553237 GOLGA6DP0CG33 693 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 KELP23276 732 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 CCNCP24863 283 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 NFKBIAP25963 317 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 ITPKBP27987 946 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 ARHGEF7Q14155 803 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 IHHQ14623 411 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 ISXQ2M1V0 245 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 TIGD7Q6NT04 549 aaPredicted RBP15.9■□□□□ 0.14
CDK4-215ENST00000553237 LVRNQ6Q4G3 990 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 RFLNAQ6ZTI6 216 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 Q6ZVL8 140 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 TAF8Q7Z7C8 310 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 PDZD3Q86UT5 571 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 CBARPQ8N350 705 aaPredicted RBP15.9■□□□□ 0.14
CDK4-215ENST00000553237 ARL10Q8N8L6 244 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 CCNYQ8ND76 341 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 TPCN2Q8NHX9 752 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 NAT6Q93015 286 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 FAF2Q96CS3 445 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 CRELD1Q96HD1 420 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 TSGA13Q96PP4 275 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 RNF157Q96PX1 679 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 RBM15Q96T37 977 aaKnown RBP eCLIP15.9■□□□□ 0.14
CDK4-215ENST00000553237 CCDC3Q9BQI4 270 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 POLR1EQ9GZS1 481 aaKnown RBP15.9■□□□□ 0.14
CDK4-215ENST00000553237 TMEM168Q9H0V1 697 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 GOLGA6AQ9NYA3 693 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 LCMT1Q9UIC8 334 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 DGKBQ9Y6T7 804 aa15.9■□□□□ 0.14
CDK4-215ENST00000553237 RP1P56715 2156 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 LRRD1A4D1F6 860 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 FZD6O60353 706 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 TNNT1P13805 278 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 CCNB1P14635 433 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 EIF2S3P41091 472 aaKnown RBP15.89■□□□□ 0.13
CDK4-215ENST00000553237 GABREP78334 506 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 FAM182AQ5T1J6 154 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 RBM44Q6ZP01 1051 aaKnown RBP15.89■□□□□ 0.13
CDK4-215ENST00000553237 USP45Q70EL2 814 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 HEATR4Q86WZ0 1026 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 SFTPA2Q8IWL1 248 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 SDR16C5Q8N3Y7 309 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 FAM46DQ8NEK8 389 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 CCL4L1Q8NHW4 92 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 FGF11Q92914 225 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 DTD2Q96FN9 168 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 ATXN7L3BQ96GX2 97 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 MCCC1Q96RQ3 725 aaPredicted RBP15.89■□□□□ 0.13
CDK4-215ENST00000553237 PHPT1Q9NRX4 125 aaPredicted RBP15.89■□□□□ 0.13
CDK4-215ENST00000553237 DTLQ9NZJ0 730 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 CHKBQ9Y259 395 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 PPIL1Q9Y3C6 166 aa15.89■□□□□ 0.13
CDK4-215ENST00000553237 PDE2AO00408 941 aaPredicted RBP15.88■□□□□ 0.13
CDK4-215ENST00000553237 TNFRSF10CO14798 259 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 JCHAINP01591 159 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 HLA-DQB2P05538 268 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 MX2P20592 715 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 ACTN2P35609 894 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 EPHB1P54762 984 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 NIPAL4Q0D2K0 466 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 TBC1D25Q3MII6 688 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 RAET1GQ6H3X3 334 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 LRRC69Q6ZNQ3 347 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 CCDC13Q8IYE1 715 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 NDUFAF2Q8N183 169 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 TC2NQ8N9U0 490 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 ARRDC2Q8TBH0 407 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 CCDC74AQ96AQ1 378 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 MRFAP1L1Q96HT8 127 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 LGMNQ99538 433 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 POLR1BQ9H9Y6 1135 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 CD84Q9UIB8 345 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 RABGEF1Q9UJ41 708 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 HYOU1Q9Y4L1 999 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 HEY1Q9Y5J3 304 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 ENTPD2Q9Y5L3 495 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 CACNA1GO43497 2377 aa15.88■□□□□ 0.13
CDK4-215ENST00000553237 PRSS38A1L453 326 aa15.87■□□□□ 0.13
CDK4-215ENST00000553237 KCNK1O00180 336 aa15.87■□□□□ 0.13
CDK4-215ENST00000553237 PSMD11O00231 422 aa15.87■□□□□ 0.13
CDK4-215ENST00000553237 RRP8O43159 456 aaKnown RBP15.87■□□□□ 0.13
CDK4-215ENST00000553237 FUCA1P04066 466 aa15.87■□□□□ 0.13
CDK4-215ENST00000553237 MYCLP1P12525 358 aaPredicted RBP15.87■□□□□ 0.13
CDK4-215ENST00000553237 KRT10P13645 584 aa15.87■□□□□ 0.13
CDK4-215ENST00000553237 HOXB3P14651 431 aaPredicted RBP15.87■□□□□ 0.13
CDK4-215ENST00000553237 CES1P23141 567 aa15.87■□□□□ 0.13
CDK4-215ENST00000553237 ARHGAP25P42331 645 aa15.87■□□□□ 0.13
CDK4-215ENST00000553237 ABCG1P45844 678 aa15.87■□□□□ 0.13
CDK4-215ENST00000553237 LSSP48449 732 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms