RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 ARL4AP40617 200 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 RENBPP51606 427 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 CDH6P55285 790 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 ERVPABLB-1P60509 514 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 POLR2LP62875 67 aaKnown RBP10.56□□□□□ -0.72
DDX23-217ENST00000553065 B4GALNT1Q00973 533 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 GBE1Q04446 702 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 ZFP36L1Q07352 338 aaKnown RBP10.56□□□□□ -0.72
DDX23-217ENST00000553065 GALNT2Q10471 571 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 HLTFQ14527 1009 aaKnown RBP eCLIP10.56□□□□□ -0.72
DDX23-217ENST00000553065 ACOX1Q15067 660 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 ELOCQ15369 112 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 ZSCAN23Q3MJ62 389 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 TDRD12Q587J7 1177 aaKnown RBP10.56□□□□□ -0.72
DDX23-217ENST00000553065 ANKRD20A8PQ5CZ79 823 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 C3orf38Q5JPI3 329 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 ALG1LQ6GMV1 187 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 ZNF574Q6ZN55 896 aaPredicted RBP10.56□□□□□ -0.72
DDX23-217ENST00000553065 SDR16C5Q8N3Y7 309 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 CNTD1Q8N815 330 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 ARL10Q8N8L6 244 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 TPCN2Q8NHX9 752 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 GPBAR1Q8TDU6 330 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 RAPGEF5Q92565 580 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 EID2BQ96D98 161 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 TRIM11Q96F44 468 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 DTD2Q96FN9 168 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 SCARF2Q96GP6 870 aaPredicted RBP10.56□□□□□ -0.72
DDX23-217ENST00000553065 FRMD8Q9BZ67 464 aaPredicted RBP10.56□□□□□ -0.72
DDX23-217ENST00000553065 ABCG8Q9H221 673 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 CPNE5Q9HCH3 593 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 CYP4F12Q9HCS2 524 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 NT5MQ9NPB1 228 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 KLQ9UEF7 1012 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 CNOT6Q9ULM6 557 aaKnown RBP10.56□□□□□ -0.72
DDX23-217ENST00000553065 LUC7L2Q9Y383 392 aaKnown RBP10.56□□□□□ -0.72
DDX23-217ENST00000553065 PCDHGA8Q9Y5G5 932 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 RNF215Q9Y6U7 377 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 GCN1Q92616 2671 aaKnown RBP10.55□□□□□ -0.72
DDX23-217ENST00000553065 MYO1FO00160 1098 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 SOCS5O75159 536 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 TCEA3O75764 348 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 HGFP14210 728 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 AK4P27144 223 aaPredicted RBP10.55□□□□□ -0.72
DDX23-217ENST00000553065 HTR1BP28222 390 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 VIPR1P32241 457 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 GARSP41250 739 aaKnown RBP10.55□□□□□ -0.72
DDX23-217ENST00000553065 MMP13P45452 471 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 BLKP51451 505 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 DSC2Q02487 901 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 CFHR1Q03591 330 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 NFKBIBQ15653 356 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 MARC1Q5VT66 337 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 RBM44Q6ZP01 1051 aaKnown RBP10.55□□□□□ -0.72
DDX23-217ENST00000553065 FAM46DQ8NEK8 389 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 ZNF564Q8TBZ8 553 aaPredicted RBP10.55□□□□□ -0.72
DDX23-217ENST00000553065 PDCD6IPQ8WUM4 868 aaKnown RBP10.55□□□□□ -0.72
DDX23-217ENST00000553065 PATE1Q8WXA2 126 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 SCAMP4Q969E2 229 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 TSGA13Q96PP4 275 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 SEMA3CQ99985 751 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 FOXP3Q9BZS1 431 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 LRRN3Q9H3W5 708 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 NCKIPSDQ9NZQ3 722 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 APPL1Q9UKG1 709 aa10.55□□□□□ -0.72
DDX23-217ENST00000553065 ATXN7L1Q9ULK2 861 aaPredicted RBP10.55□□□□□ -0.72
DDX23-217ENST00000553065 HELZ2Q9BYK8 2649 aaKnown RBP10.54□□□□□ -0.72
DDX23-217ENST00000553065 AHCTF1Q8WYP5 2266 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 A0A0J9YYE9 177 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 PRSS38A1L453 326 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 MATN3O15232 486 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 PPM1DO15297 605 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 RRP8O43159 456 aaKnown RBP10.54□□□□□ -0.72
DDX23-217ENST00000553065 EML2O95834 649 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 CPP00450 1065 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 TRBC1P01850 177 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 KDELR1P24390 212 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 CCNCP24863 283 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 ETV5P41161 510 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 RPIAP49247 311 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 ARSDP51689 593 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 CDK3Q00526 305 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 DPTQ07507 201 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 SRSF6Q13247 344 aaKnown RBP10.54□□□□□ -0.72
DDX23-217ENST00000553065 ZNF235Q14590 738 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 CERCAMQ5T4B2 595 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 CFAP58Q5T655 872 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 DENND2CQ68D51 928 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 LRRC69Q6ZNQ3 347 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 TAF8Q7Z7C8 310 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 CLEC14AQ86T13 490 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 NLRP8Q86W28 1048 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 HEATR4Q86WZ0 1026 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 GKN2Q86XP6 184 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 LSMEM2Q8N112 164 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 Q8N9G6 341 aaPredicted RBP10.54□□□□□ -0.72
DDX23-217ENST00000553065 ZNF248Q8NDW4 579 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 SNRNP27Q8WVK2 155 aaKnown RBP10.54□□□□□ -0.72
DDX23-217ENST00000553065 NAT6Q93015 286 aa10.54□□□□□ -0.72
DDX23-217ENST00000553065 FATE1Q969F0 183 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms