RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 GAREM1Q9H706 876 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 WDR26Q9H7D7 661 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 USP29Q9HBJ7 922 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 ARNT2Q9HBZ2 717 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 CD93Q9NPY3 652 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 NFKBIL1Q9UBC1 381 aaPredicted RBP10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 ZFR2Q9UPR6 939 aaKnown RBP10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 CSNK1G3Q9Y6M4 447 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 WDR87Q6ZQQ6 2873 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 KNL1Q8NG31 2342 aa10.28□□□□□ -0.76
TRAFD1-208ENST00000552890 SPTY2D1-AS1A0A0U1RR47 76 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 A0A1B0GVT2 93 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 KLHL33A6NCF5 533 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 CCDC188H7C350 402 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 SMAPO00193 183 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 PLK4O00444 970 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 IFNB1P01574 187 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 ALPIP09923 528 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 CEACAM1P13688 526 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 NFKB1P19838 968 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 HNF1BP35680 557 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 HMGCLP35914 325 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 TRIM23P36406 574 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 PPARGP37231 505 aaPredicted RBP10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 STC1P52823 247 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 KIAA1024LP59773 190 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 PFN3P60673 137 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 NIPAL4Q0D2K0 466 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 SF3A2Q15428 464 aaKnown RBP10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 OASLQ15646 514 aaKnown RBP10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 SLC1A5Q15758 541 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 KIF19Q2TAC6 998 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 LRRC66Q68CR7 880 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 LVRNQ6Q4G3 990 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 Q6ZSR6 202 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 SLC35F6Q8N357 371 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 FSTL5Q8N475 847 aaPredicted RBP10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 DCLK2Q8N568 766 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 IPMKQ8NFU5 416 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 HEXDCQ8WVB3 486 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 DTD2Q96FN9 168 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 COQ10AQ96MF6 247 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 SLC6A18Q96N87 628 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 PLEKHG4BQ96PX9 1271 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 TTC1Q99614 292 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 ORAI3Q9BRQ5 295 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 TMEM121Q9BTD3 319 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 ZCCHC2Q9C0B9 1178 aaKnown RBP10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 FAM83DQ9H4H8 585 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 RMI1Q9H9A7 625 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 PARD6AQ9NPB6 346 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 TM7SF3Q9NS93 570 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 APPL1Q9UKG1 709 aa10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 ATXN2Q99700 1313 aaKnown RBP10.27□□□□□ -0.77
TRAFD1-208ENST00000552890 VPS13AQ96RL7 3174 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 A0A0U1RQJ8 604 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 A0A1B0GTQ1 180 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 PRLP01236 227 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 MMP2P08253 660 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 CASQ1P31415 396 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 GPR1P46091 355 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 RPIAP49247 311 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 DUSP3P51452 185 aaPredicted RBP10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 ETF1P62495 437 aaKnown RBP10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 FOXK2Q01167 660 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 PPARDQ03181 441 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 ITGA9Q13797 1035 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 ELOCQ15369 112 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 CNGA3Q16281 694 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 PCSK7Q16549 785 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 QPCTQ16769 361 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 PAPD7Q5XG87 772 aaKnown RBP10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 PNCKQ6P2M8 343 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 CRTC1Q6UUV9 634 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 ADAMTSL4Q6UY14 1074 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 RANBP10Q6VN20 620 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 GLT6D1Q7Z4J2 308 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 PCGF5Q86SE9 256 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 KLHDC8BQ8IXV7 354 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 CBARPQ8N350 705 aaPredicted RBP10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 AVL9Q8NBF6 648 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 OR6C4Q8NGE1 309 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 GABPB2Q8TAK5 448 aaPredicted RBP10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 BRSK1Q8TDC3 778 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 PEX13Q92968 403 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 MAGOHBQ96A72 148 aaKnown RBP10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 AP2M1Q96CW1 435 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 WDR92Q96MX6 357 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 TRIB3Q96RU7 358 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 KLF6Q99612 283 aaPredicted RBP10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 TBL1YQ9BQ87 522 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 APOOQ9BUR5 198 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 FRMD8Q9BZ67 464 aaPredicted RBP10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 EIF2B3Q9NR50 452 aaKnown RBP10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 SPASTQ9UBP0 616 aa10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.26□□□□□ -0.77
TRAFD1-208ENST00000552890 CEP250Q9BV73 2442 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms