RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 SULT1E1P49888 294 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 RAD23AP54725 363 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 LSM3P62310 102 aaKnown RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 ECT2LQ008S8 904 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 TRAP1Q12931 704 aaKnown RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 SELENBP1Q13228 472 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 NAB1Q13506 487 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 PHKG1Q16816 387 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 CYP51A1Q16850 503 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 IMPG1Q17R60 797 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 GEN1Q17RS7 908 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 FUT11Q495W5 492 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 CCDC92Q53HC0 331 aaPredicted RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 CELF3Q5SZQ8 465 aaKnown RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 INTS11Q5TA45 600 aaKnown RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 C4orf22Q6V702 233 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 USP51Q70EK9 711 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 LARP4Q71RC2 724 aaKnown RBP eCLIP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 CUZD1Q86UP6 607 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 PSTKQ8IV42 348 aaKnown RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 MTMR14Q8NCE2 650 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 ZNF420Q8TAQ5 688 aaPredicted RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 DNAJB14Q8TBM8 379 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 SLC22A17Q8WUG5 538 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 STARD8Q92502 1023 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 PBXIP1Q96AQ6 731 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 C18orf25Q96B23 403 aaPredicted RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 SH3YL1Q96HL8 342 aaPredicted RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 CELF6Q96J87 481 aaKnown RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 MYRFLQ96LU7 910 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 MEAF6Q9HAF1 191 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 IGSF5Q9NSI5 407 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 PIGVQ9NUD9 493 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 BFARQ9NZS9 450 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 CACNG4Q9UBN1 327 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 GNPTGQ9UJJ9 305 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 UTS2RQ9UKP6 389 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 GIT1Q9Y2X7 761 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 TMEM98Q9Y2Y6 226 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 ACOT9Q9Y305 439 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 NRCAMQ92823 1304 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 PARP14Q460N5 1801 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 FAM95CA0A1B0GW59 222 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 ASPDHA6ND91 283 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 A8MT66 165 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 CLDN5O00501 218 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 DCLK1O15075 740 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 TIMM44O43615 452 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 HUS1O60921 280 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 BCAS1O75363 584 aaPredicted RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 SRP72O76094 671 aaKnown RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 BAIAP3O94812 1187 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 BCL10O95999 233 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 TGFB3P10600 412 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 JAK1P23458 1154 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 SLC6A2P23975 617 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 TKTP29401 623 aaKnown RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 SLC1A2P43004 574 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 ARCN1P48444 511 aaKnown RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 ACADVLP49748 655 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 ADARB1P78563 741 aaKnown RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 CACNB2Q08289 660 aaPredicted RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 ITKQ08881 620 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 STX5Q13190 355 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 SLC12A1Q13621 1099 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 MAPK11Q15759 364 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 AAK1Q2M2I8 961 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 MAP7D1Q3KQU3 841 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 SAMD4BQ5PRF9 694 aaKnown RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 BTBD8Q5XKL5 378 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 LAIR2Q6ISS4 152 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 TMEM207Q6UWW9 146 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 ABRAXAS1Q6UWZ7 409 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 ARMCX2Q7L311 632 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 SLC26A9Q7LBE3 791 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 NANOGNBQ7Z5D8 188 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 SPRED1Q7Z699 444 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 EXOC8Q8IYI6 725 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 BEST2Q8NFU1 509 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 TRPC4APQ8TEL6 797 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 SEPT8Q92599 483 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 SLC30A3Q99726 388 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 NAT9Q9BTE0 207 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 FUNDC2Q9BWH2 189 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 DNAI2Q9GZS0 605 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 MIR1-1HGQ9H1L0 117 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 ADAMTS10Q9H324 1103 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 TPK1Q9H3S4 243 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 RHOJQ9H4E5 214 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 AKTIPQ9H8T0 292 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 NTN4Q9HB63 628 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 TXNRD2Q9NNW7 524 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 TBC1D13Q9NVG8 400 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 FBXO10Q9UK96 956 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 PTBP2Q9UKA9 531 aaKnown RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 FNDC3AQ9Y2H6 1198 aaKnown RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 PMF1-BGLAPU3KQ54 211 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 A0A0J9YYE9 177 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 M0QYT0 321 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms