RNA–Protein interactions for RNA: ENST00000550889.5

ATXN2-222, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-222	ENST00000550889	PRKCH	P24723	683 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	TPI1	P60174	286 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	ERVFRD-1	P60508	538 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	SRSF3	P84103	164 aa	Known RBP	4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	KIF5A	Q12840	1032 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	BYSL	Q13895	437 aa	Known RBP	4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	DPYS	Q14117	519 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	ELAVL3	Q14576	367 aa	Known RBP	4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	MESD	Q14696	234 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	POLD3	Q15054	466 aa	Predicted RBP	4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	CA9	Q16790	459 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	FNDC3B	Q53EP0	1204 aa	Known RBP	4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	INO80D	Q53TQ3	878 aa	Predicted RBP	4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	SPDYC	Q5MJ68	293 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	C9orf64	Q5T6V5	341 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	CCDC181	Q5TID7	509 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	DAB2IP	Q5VWQ8	1189 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	AFMID	Q63HM1	303 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	TXNRD3NB	Q6F5E7	133 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	C11orf63	Q6NUN7	778 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	TSSK4	Q6SA08	328 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	C11orf74	Q86VG3	221 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	WDR5B	Q86VZ2	330 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	LRRC49	Q8IUZ0	686 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	SH2D3C	Q8N5H7	860 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	RNF10	Q8N5U6	811 aa	Known RBP	4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	MDGA1	Q8NFP4	955 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	OR2T3	Q8NH03	318 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	FRS2	Q8WU20	508 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	CASKIN2	Q8WXE0	1202 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	ARHGEF2	Q92974	986 aa	Known RBP	4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	ISG20	Q96AZ6	181 aa	Known RBP	4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	FAF2	Q96CS3	445 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	PDLIM2	Q96JY6	352 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	MRGPRX1	Q96LB2	322 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	CSPG4P5	Q96PW8	444 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	PSMB7	Q99436	277 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	SGPP1	Q9BX95	441 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	KLC2	Q9H0B6	622 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	EPN3	Q9H201	632 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	EPC1	Q9H2F5	836 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	LRRC19	Q9H756	370 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	YY1AP1	Q9H869	796 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	TNFRSF12A	Q9NP84	129 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	GOLGA6A	Q9NYA3	693 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	GULP1	Q9UBP9	304 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	VPS51	Q9UID3	782 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	SLCO3A1	Q9UIG8	710 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	HPCAL4	Q9UM19	191 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	SCML1	Q9UN30	329 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	ALG6	Q9Y672	507 aa		4.76	□□□□□ -1.65
ATXN2-222	ENST00000550889	EDDM13	A0A1B0GTR0	161 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	TCRBV21S2A2	A0A5A6	115 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	CBX4	O00257	560 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	MCF2L	O15068	1137 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	DCLK1	O15075	740 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	ALOX15B	O15296	676 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	DAPK3	O43293	454 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	PSTPIP1	O43586	416 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	ZNF500	O60304	480 aa	Predicted RBP	4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	BUB1B	O60566	1050 aa	Predicted RBP	4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	ERCC2	P18074	760 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	GABRG2	P18507	467 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	COMT	P21964	271 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	VIPR1	P32241	457 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	SERPINB6	P35237	376 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	SSR1	P43307	286 aa	Known RBP	4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	SERPINH1	P50454	418 aa	Known RBP	4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	COPA	P53621	1224 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	CDH6	P55285	790 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	TAS2R40	P59535	323 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	ARF5	P84085	180 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	NHLH1	Q02575	133 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	SERINC3	Q13530	473 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	DPYSL3	Q14195	570 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	SF1	Q15637	639 aa	Known RBP	4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	PRSS53	Q2L4Q9	553 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	SMTNL2	Q2TAL5	461 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	USP39	Q53GS9	565 aa	Known RBP	4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	IL31	Q6EBC2	164 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	ANO7	Q6IWH7	933 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	ATG14	Q6ZNE5	492 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	TMPRSS6	Q8IU80	811 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	RHOT1	Q8IXI2	618 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	KCTD6	Q8NC69	237 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	OR7D4	Q8NG98	312 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	GAB3	Q8WWW8	586 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	HSPH1	Q92598	858 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	ATOH1	Q92858	354 aa	Predicted RBP	4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	PTPRN2	Q92932	1015 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	ZC3H10	Q96K80	434 aa	Known RBP	4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	RPL10L	Q96L21	214 aa	Known RBP	4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	KRTAP4-12	Q9BQ66	201 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	TSGA10	Q9BZW7	698 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	PCDH18	Q9HCL0	1135 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	ZDHHC4	Q9NPG8	344 aa		4.75	□□□□□ -1.65
ATXN2-222	ENST00000550889	PRSS16	Q9NQE7	514 aa		4.75	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms