RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 RANBP9Q96S59 729 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 LYSMD1Q96S90 227 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 SRPK1Q96SB4 655 aaKnown RBP10.3□□□□□ -0.76
RAB5C-207ENST00000550504 KIFC1Q9BW19 673 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 TXLNGYQ9BZA5 131 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 PHACTR1Q9C0D0 580 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 SEMA4AQ9H3S1 761 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 TRABDQ9H4I3 376 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 VPS37BQ9H9H4 285 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 ZFYVE1Q9HBF4 777 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 BPIFA1Q9NP55 256 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 ARGLU1Q9NWB6 273 aaPredicted RBP10.3□□□□□ -0.76
RAB5C-207ENST00000550504 NINJ2Q9NZG7 142 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 EBF1Q9UH73 591 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 SCML1Q9UN30 329 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 CYP8B1Q9UNU6 501 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 FNDC3AQ9Y2H6 1198 aaKnown RBP10.3□□□□□ -0.76
RAB5C-207ENST00000550504 FADS3Q9Y5Q0 445 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 RPS6KL1Q9Y6S9 549 aa10.3□□□□□ -0.76
RAB5C-207ENST00000550504 TBC1D3DA0A087WVF3 549 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 TBC1D3IA0A087WXS9 549 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 TBC1D3EA0A087X179 549 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 TBC1D3KA0A087X1G2 549 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 FAM237BA0A1B0GVD1 139 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 TBC1D3FA6NER0 549 aaPredicted RBP10.29□□□□□ -0.76
RAB5C-207ENST00000550504 MROH6A6NGR9 719 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 TBC1D3LB9A6J9 549 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 AREL1O15033 823 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 STX7O15400 261 aaKnown RBP10.29□□□□□ -0.76
RAB5C-207ENST00000550504 PCDH8O95206 1070 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 ACSL3O95573 720 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 POLBP06746 335 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 C1SP09871 688 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 ELFN1P0C7U0 828 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 TBC1D3HP0C7X1 549 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 SSTR1P30872 391 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 LIG3P49916 1009 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 CCR3P51677 355 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 SUOXP51687 545 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 CLCN5P51795 746 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 ZNF140P52738 457 aaPredicted RBP10.29□□□□□ -0.76
RAB5C-207ENST00000550504 GPX6P59796 221 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 PTSQ03393 145 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 SFSWAPQ12872 951 aaKnown RBP10.29□□□□□ -0.76
RAB5C-207ENST00000550504 CBLBQ13191 982 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 LAMB3Q13751 1172 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 ACOX1Q15067 660 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 SKIDA1Q1XH10 827 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 TMEM52BQ4KMG9 183 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 ALS2CLQ60I27 953 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 TBC1D3GQ6DHY5 549 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 TBC1D3CQ6IPX1 549 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 ESRP1Q6NXG1 681 aaKnown RBP10.29□□□□□ -0.76
RAB5C-207ENST00000550504 FBXO38Q6PIJ6 1188 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 LIPIQ6XZB0 460 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 RFLNAQ6ZTI6 216 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 USP30Q70CQ3 517 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 NLRP9Q7RTR0 991 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 HSD11B1LQ7Z5J1 315 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 KBTBD6Q86V97 674 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 RASSF3Q86WH2 238 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 RELL1Q8IUW5 271 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 CCNJLQ8IV13 435 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 TBC1D3Q8IZP1 549 aaPredicted RBP10.29□□□□□ -0.76
RAB5C-207ENST00000550504 CXorf40AQ8TE69 158 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 PTCD2Q8WV60 388 aaKnown RBP10.29□□□□□ -0.76
RAB5C-207ENST00000550504 RLN3Q8WXF3 142 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 FCRL3Q96P31 734 aaPredicted RBP10.29□□□□□ -0.76
RAB5C-207ENST00000550504 NAT9Q9BTE0 207 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 IER2Q9BTL4 223 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 PLAC1Q9HBJ0 212 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 MRM3Q9HC36 420 aaKnown RBP10.29□□□□□ -0.76
RAB5C-207ENST00000550504 LRRC4CQ9HCJ2 640 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 ITM2CQ9NQX7 267 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 IL1RAPL1Q9NZN1 696 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 COQ6Q9Y2Z9 468 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 PKP3Q9Y446 797 aa10.29□□□□□ -0.76
RAB5C-207ENST00000550504 OR51F1A6NGY5 319 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 GOLGA8KD6RF30 607 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 GOLGA8TH3BQL2 631 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 K7ESF4 209 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 SLC7A4O43246 635 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 TSPAN6O43657 245 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 PLRG1O43660 514 aaKnown RBP10.28□□□□□ -0.76
RAB5C-207ENST00000550504 LZTS3O60299 673 aaPredicted RBP10.28□□□□□ -0.76
RAB5C-207ENST00000550504 TTC4O95801 387 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 C6P13671 934 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 ZNF30P17039 623 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 ACSL1P33121 698 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 ARSDP51689 593 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 STC1P52823 247 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 ADPRHP54922 357 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 PDE1BQ01064 536 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 DMWDQ09019 674 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 CRYMQ14894 314 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 SPANXN3Q5MJ09 141 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 SEL1L3Q68CR1 1132 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 TSSK4Q6SA08 328 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 C3orf62Q6ZUJ4 267 aa10.28□□□□□ -0.76
RAB5C-207ENST00000550504 TRMT10CQ7L0Y3 403 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms