RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 MKS1Q9NXB0 559 aa10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 EURLQ9NYK6 297 aa10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 DOT1LQ8TEK3 1739 aa10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 SYNDIG1LA6NDD5 238 aa10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 CD3EAPO15446 510 aaKnown RBP10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 KCNH1O95259 989 aa10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 ANXA6P08133 673 aa10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 CHRM1P11229 460 aaPredicted RBP10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 AXLP30530 894 aa10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 CYP2C18P33260 490 aa10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 CPT1AP50416 773 aa10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 RPL38P63173 70 aaKnown RBP10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 HERC3Q15034 1050 aa10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 DEPDC1Q5TB30 811 aa10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 ARHGAP17Q68EM7 881 aa10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 DCLRE1AQ6PJP8 1040 aa10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 GPRIN3Q6ZVF9 776 aa10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 SPPL2AQ8TCT8 520 aa10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 APOL4Q9BPW4 351 aa10.23□□□□□ -0.77
SMARCC2-209ENST00000550164 A0A1W2PPW3 197 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 UBXN8O00124 270 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 SLC22A2O15244 555 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 SIX3O95343 332 aaPredicted RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 TFPTP0C1Z6 253 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 UGT1A6P19224 532 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 HLA-DPA1P20036 260 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 UGT1A1P22309 533 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 UGT1A4P22310 534 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 UGT1A3P35503 534 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 UGT1A5P35504 534 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 ATP6V1E1P36543 226 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 PPP3CCP48454 512 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 GNA12Q03113 381 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 EPS8Q12929 822 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 TRAF3Q13114 568 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 HFE2Q6ZVN8 426 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 TMEM86AQ8N2M4 240 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 STX19Q8N4C7 294 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 POC5Q8NA72 575 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 CAPSLQ8WWF8 208 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 TP73O15350 636 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 SH3BGRLO75368 114 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 C22orf31O95567 290 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 MYCP01106 439 aaPredicted RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 IL1BP01584 269 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 SLC11A2P49281 568 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 LILRA4P59901 499 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 RPL26P61254 145 aaKnown RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 PITX1P78337 314 aaPredicted RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 MFSD10Q14728 455 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 DDR2Q16832 855 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 TTLL9Q3SXZ7 439 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 SLC39A12Q504Y0 691 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 OGFRL1Q5TC84 451 aaPredicted RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 NAPRTQ6XQN6 538 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 CHST15Q7LFX5 561 aaPredicted RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 KBTBD6Q86V97 674 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 SVOPQ8N4V2 548 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 ZNF540Q8NDQ6 660 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 HM13Q8TCT9 377 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 TRPM4Q8TD43 1214 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 C12orf43Q96C57 262 aaKnown RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 GPATCH1Q9BRR8 931 aaKnown RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 ABHD16BQ9H3Z7 469 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 BPIFA1Q9NP55 256 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 SLC2A6Q9UGQ3 507 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 CDH9Q9ULB4 789 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 G3V2T6 193 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 CXCL11O14625 94 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 PLSCR1O15162 318 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 RAD51BO15315 384 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 DDNO94850 711 aaPredicted RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 DBTP11182 482 aaKnown RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 ZNF37AP17032 561 aaPredicted RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 ALDH4A1P30038 563 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 S100A3P33764 101 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 CAPGP40121 348 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 MTHFRP42898 656 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 PRIM2P49643 509 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 CDK9P50750 372 aaKnown RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 AIF1P55008 147 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 BEX3Q00994 111 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 ZBED5Q49AG3 693 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 PRAMEF19Q5SWL8 479 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 OGFOD2Q6N063 350 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 THAP5Q7Z6K1 395 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 SLC44A2Q8IWA5 706 aaPredicted RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 NAT16Q8N8M0 369 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 GPR22Q99680 433 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 CHID1Q9BWS9 393 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 GIMAP4Q9NUV9 329 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 SPASTQ9UBP0 616 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 GIMAP2Q9UG22 337 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 CNTNAP1P78357 1384 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 MYBPHLA2RUH7 354 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 CNOT3O75175 753 aaKnown RBP10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 MED26O95402 600 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 MLYCDO95822 493 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 KRT6AP02538 564 aa10.22□□□□□ -0.77
SMARCC2-209ENST00000550164 KRT6BP04259 564 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms