RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 TAS1R1Q7RTX1 841 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 RABEPKQ7Z6M1 372 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 CCDC185Q8N715 623 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 NPWQ8N729 165 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 FAM181AQ8N9Y4 354 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 OR4K1Q8NGD4 311 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 GSDMBQ8TAX9 411 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 CALML6Q8TD86 181 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 ZNF483Q8TF39 744 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 CCDC28BQ9BUN5 200 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 PBX4Q9BYU1 374 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 SLC6A16Q9GZN6 736 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 SEMA4AQ9H3S1 761 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 DPEP2Q9H4A9 486 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 TFB2MQ9H5Q4 396 aaKnown RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 SYNCQ9H7C4 482 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 SGK2Q9HBY8 427 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 HHATLQ9HCP6 504 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 PCDHGB3Q9Y5G1 929 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 EDDM13A0A1B0GTR0 161 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 HMX2A2RU54 273 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 METTL12A8MUP2 240 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 NFATC1O95644 943 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 KLKB1P03952 638 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 NFKBIAP25963 317 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 FOXN2P32314 431 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 GJA4P35212 333 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 MAGEA10P43363 369 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 PXNP49023 591 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 LBX1P52954 281 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 PEX6Q13608 980 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 PPP1R3AQ16821 1122 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 NIPAL1Q6NVV3 410 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 TRABD2AQ86V40 505 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 ADGRG2Q8IZP9 1017 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 GABPB2Q8TAK5 448 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 ZNF514Q96K75 400 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 DNAJC28Q9NX36 388 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 MID2Q9UJV3 735 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 ADAM29Q9UKF5 820 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 AP3M1Q9Y2T2 418 aa4.91□□□□□ -1.62
SCAF11-212ENST00000549162 POLR3KQ9Y2Y1 108 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-212ENST00000549162 ZNF195O14628 629 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 KHNYNO15037 678 aaKnown RBP4.9□□□□□ -1.62
SCAF11-212ENST00000549162 MBTPS2O43462 519 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 SOX30O94993 753 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 NDST3O95803 873 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 SOD1P00441 154 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 MMP12P39900 470 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 TRA2BP62995 288 aaKnown RBP4.9□□□□□ -1.62
SCAF11-212ENST00000549162 ZXDBP98169 803 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 FOXM1Q08050 763 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 ADIGQ0VDE8 80 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 AUHQ13825 339 aaKnown RBP4.9□□□□□ -1.62
SCAF11-212ENST00000549162 ZNF365Q70YC5 407 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 ABI3BPQ7Z7G0 1075 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 ADGRG6Q86SQ4 1221 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 ADHFE1Q8IWW8 467 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 CCDC116Q8IYX3 515 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 KCNJ9Q92806 393 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 LENG1Q96BZ8 264 aaPredicted RBP4.9□□□□□ -1.62
SCAF11-212ENST00000549162 CCDC126Q96EE4 140 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 SCRN2Q96FV2 425 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 MPP4Q96JB8 637 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 CFAP57Q96MR6 1250 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 SLC17A4Q9Y2C5 497 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 MED16Q9Y2X0 877 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 SNX9Q9Y5X1 595 aa4.9□□□□□ -1.62
SCAF11-212ENST00000549162 FITM1A5D6W6 292 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 H3BMH7 237 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 GPC4O75487 556 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 LRIG2O94898 1065 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 PF4V1P10720 104 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 FOSL2P15408 326 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 PSMA2P25787 234 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 CRABP2P29373 138 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 PAFAH1B1P43034 410 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 GNA12Q03113 381 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 IHHQ14623 411 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 UGP2Q16851 508 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 SPRED3Q2MJR0 410 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 ANKRD20A2Q5SQ80 823 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 ZNF362Q5T0B9 420 aaPredicted RBP4.9□□□□□ -1.63
SCAF11-212ENST00000549162 ANKRD20A1Q5TYW2 823 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 ANKRD20A3Q5VUR7 823 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 TXNDC11Q6PKC3 985 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 BTLAQ7Z6A9 289 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 DNAJB7Q7Z6W7 309 aaPredicted RBP4.9□□□□□ -1.63
SCAF11-212ENST00000549162 TMEM173Q86WV6 379 aaPredicted RBP4.9□□□□□ -1.63
SCAF11-212ENST00000549162 NPAS3Q8IXF0 933 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 SIX6OS1Q8N1H7 587 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 CNTNAP3BQ96NU0 1288 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 MCEEQ96PE7 176 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 FCRL4Q96PJ5 515 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 PNKPQ96T60 521 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 RBBP8Q99708 897 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 CNTNAP3Q9BZ76 1288 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 SPHK2Q9NRA0 654 aa4.9□□□□□ -1.63
SCAF11-212ENST00000549162 PIH1D1Q9NWS0 290 aaKnown RBP4.9□□□□□ -1.63
SCAF11-212ENST00000549162 DKK4Q9UBT3 224 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms