RNA–Protein interactions for RNA: ENST00000548232.1

NR4A1-209, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best) BASIC

Gene NR4A1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-209ENST00000548232 PRICKLE2Q7Z3G6 844 aa13.15□□□□□ -0.3
NR4A1-209ENST00000548232 KIAA1328Q86T90 577 aa13.15□□□□□ -0.3
NR4A1-209ENST00000548232 PLA2G15Q8NCC3 412 aa13.15□□□□□ -0.3
NR4A1-209ENST00000548232 SLC35G2Q8TBE7 412 aa13.15□□□□□ -0.3
NR4A1-209ENST00000548232 HCAR2Q8TDS4 363 aa13.15□□□□□ -0.3
NR4A1-209ENST00000548232 CTNNBL1Q8WYA6 563 aaPredicted RBP13.15□□□□□ -0.3
NR4A1-209ENST00000548232 TRIM44Q96DX7 344 aaPredicted RBP13.15□□□□□ -0.3
NR4A1-209ENST00000548232 TRIM11Q96F44 468 aa13.15□□□□□ -0.3
NR4A1-209ENST00000548232 CELF6Q96J87 481 aaKnown RBP13.15□□□□□ -0.3
NR4A1-209ENST00000548232 ZNF641Q96N77 438 aaPredicted RBP13.15□□□□□ -0.3
NR4A1-209ENST00000548232 ARHGAP9Q9BRR9 750 aa13.15□□□□□ -0.3
NR4A1-209ENST00000548232 TRMT1Q9NXH9 659 aaKnown RBP13.15□□□□□ -0.3
NR4A1-209ENST00000548232 FZD10Q9ULW2 581 aa13.15□□□□□ -0.3
NR4A1-209ENST00000548232 GRID2IPA4D2P6 1211 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 D6RAR5 112 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 CACNB4O00305 520 aaPredicted RBP13.14□□□□□ -0.31
NR4A1-209ENST00000548232 DAPK3O43293 454 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 TCF4P15884 667 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 ZNF143P52747 638 aaPredicted RBP13.14□□□□□ -0.31
NR4A1-209ENST00000548232 NFATC3Q12968 1075 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 SRSF6Q13247 344 aaKnown RBP13.14□□□□□ -0.31
NR4A1-209ENST00000548232 EIF3IQ13347 325 aaKnown RBP13.14□□□□□ -0.31
NR4A1-209ENST00000548232 ARHGEF7Q14155 803 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 GRM3Q14832 879 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 PPP1R2P3Q6NXS1 205 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 DCUN1D2Q6PH85 259 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 BRAT1Q6PJG6 821 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 CYP4V2Q6ZWL3 525 aaPredicted RBP13.14□□□□□ -0.31
NR4A1-209ENST00000548232 SRLQ86TD4 932 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 CCNJLQ8IV13 435 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 SFTPA2Q8IWL1 248 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 UMODL1-AS1Q8N2C9 162 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 EXD3Q8N9H8 876 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 LRRC57Q8N9N7 239 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 OR6C4Q8NGE1 309 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 ZNF564Q8TBZ8 553 aaPredicted RBP13.14□□□□□ -0.31
NR4A1-209ENST00000548232 OR1E3Q8WZA6 343 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 PDXPQ96GD0 296 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 CNPY3Q9BT09 278 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 FAM117AQ9C073 453 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 DPEP2Q9H4A9 486 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 CLMPQ9H6B4 373 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 SUDS3Q9H7L9 328 aaPredicted RBP13.14□□□□□ -0.31
NR4A1-209ENST00000548232 LZTFL1Q9NQ48 299 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 MRPL40Q9NQ50 206 aaKnown RBP13.14□□□□□ -0.31
NR4A1-209ENST00000548232 GPATCH2LQ9NWQ4 482 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 LRIT1Q9P2V4 623 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 ATP8A1Q9Y2Q0 1164 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 LOXL2Q9Y4K0 774 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 PCDHGA7Q9Y5G6 932 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 HEMK1Q9Y5R4 338 aaPredicted RBP13.14□□□□□ -0.31
NR4A1-209ENST00000548232 DOCK4Q8N1I0 1966 aa13.14□□□□□ -0.31
NR4A1-209ENST00000548232 MACROD2A1Z1Q3 448 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 TMEM202A6NGA9 273 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 B4DGG1 531 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 FGF10O15520 208 aaPredicted RBP13.13□□□□□ -0.31
NR4A1-209ENST00000548232 NOBOXO60393 691 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 PALMO75781 387 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 RECQL5O94762 991 aaPredicted RBP13.13□□□□□ -0.31
NR4A1-209ENST00000548232 ITIH1P19827 911 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 PAPOLAP51003 745 aaKnown RBP13.13□□□□□ -0.31
NR4A1-209ENST00000548232 MAPK10P53779 464 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 TPI1P60174 286 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 MTM1Q13496 603 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 PHF19Q5T6S3 580 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 ZFAND4Q86XD8 727 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 ZSWIM9Q86XI8 627 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 TSEN2Q8NCE0 465 aaKnown RBP13.13□□□□□ -0.31
NR4A1-209ENST00000548232 OR56A4Q8NGH8 313 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 EXTL1Q92935 676 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 FUBP1Q96AE4 644 aaKnown RBP13.13□□□□□ -0.31
NR4A1-209ENST00000548232 SGF29Q96ES7 293 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 RBM15Q96T37 977 aaKnown RBP eCLIP13.13□□□□□ -0.31
NR4A1-209ENST00000548232 SLC39A8Q9C0K1 460 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 TMEM168Q9H0V1 697 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 ATP13A3Q9H7F0 1226 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 CYP4F12Q9HCS2 524 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 PARVAQ9NVD7 372 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 SEPT10Q9P0V9 454 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 UVRAGQ9P2Y5 699 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 PCDHB11Q9Y5F2 797 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 RNF215Q9Y6U7 377 aa13.13□□□□□ -0.31
NR4A1-209ENST00000548232 PRAMEF33A0A0G2JMD5 474 aa13.12□□□□□ -0.31
NR4A1-209ENST00000548232 TSPAN11A1L157 253 aa13.12□□□□□ -0.31
NR4A1-209ENST00000548232 ARHGAP42A6NI28 874 aa13.12□□□□□ -0.31
NR4A1-209ENST00000548232 WASH4PA8MWX3 477 aa13.12□□□□□ -0.31
NR4A1-209ENST00000548232 NVLO15381 856 aaKnown RBP13.12□□□□□ -0.31
NR4A1-209ENST00000548232 NRDCO43847 1150 aa13.12□□□□□ -0.31
NR4A1-209ENST00000548232 PRAMEF10O60809 474 aa13.12□□□□□ -0.31
NR4A1-209ENST00000548232 PRAMEF11O60813 436 aa13.12□□□□□ -0.31
NR4A1-209ENST00000548232 IPO7O95373 1038 aaKnown RBP13.12□□□□□ -0.31
NR4A1-209ENST00000548232 ELFN1P0C7U0 828 aa13.12□□□□□ -0.31
NR4A1-209ENST00000548232 GLB1P16278 677 aa13.12□□□□□ -0.31
NR4A1-209ENST00000548232 DESP17661 470 aa13.12□□□□□ -0.31
NR4A1-209ENST00000548232 KELP23276 732 aa13.12□□□□□ -0.31
NR4A1-209ENST00000548232 SERPINA4P29622 427 aa13.12□□□□□ -0.31
NR4A1-209ENST00000548232 CCKBRP32239 447 aa13.12□□□□□ -0.31
NR4A1-209ENST00000548232 MMP12P39900 470 aa13.12□□□□□ -0.31
NR4A1-209ENST00000548232 RGRP47804 291 aa13.12□□□□□ -0.31
NR4A1-209ENST00000548232 NDST2P52849 883 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms