RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 GTSE1Q9NYZ3 720 aa12.39□□□□□ -0.43
RAB5B-204ENST00000548068 DKK3Q9UBP4 350 aa12.39□□□□□ -0.43
RAB5B-204ENST00000548068 SUN2Q9UH99 717 aa12.39□□□□□ -0.43
RAB5B-204ENST00000548068 KCTD3Q9Y597 815 aa12.39□□□□□ -0.43
RAB5B-204ENST00000548068 HMX2A2RU54 273 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 CCDC162PA2VCL2 907 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 GOLGA8RI6L899 631 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 ARNTLO00327 626 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 TPP1O14773 563 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 GLRA3O75311 464 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 SLC4A1P02730 911 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 AHSGP02765 367 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 ALDOAP04075 364 aaKnown RBP12.38□□□□□ -0.43
RAB5B-204ENST00000548068 GSTA1P08263 222 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 ZNF30P17039 623 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 CTPS1P17812 591 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 XPAP23025 273 aaPredicted RBP12.38□□□□□ -0.43
RAB5B-204ENST00000548068 PMLP29590 882 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 GKP32189 559 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 LSP1P33241 339 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 HNF1BP35680 557 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 PPARGP37231 505 aaPredicted RBP12.38□□□□□ -0.43
RAB5B-204ENST00000548068 MAGEA12P43365 314 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 TNFRSF4P43489 277 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 ARSDP51689 593 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 NEK3P51956 506 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 SLC12A2P55011 1212 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 TMPRSS15P98073 1019 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 POU4F1Q01851 419 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 CTBP1Q13363 440 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 ZNF234Q14588 700 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 TERF2Q15554 542 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 INSCQ1MX18 579 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 ZNF805Q5CZA5 627 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 SERPINA13PQ6UXR4 307 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 SH2D5Q6ZV89 423 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 LYSMD3Q7Z3D4 306 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 TAX1BP1Q86VP1 789 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 DENND6AQ8IWF6 608 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 CHST14Q8NCH0 376 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 TMIEQ8NEW7 156 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 GRIN3AQ8TCU5 1115 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 MGARPQ8TDB4 240 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 ATXN2LQ8WWM7 1075 aaKnown RBP12.38□□□□□ -0.43
RAB5B-204ENST00000548068 SCRN2Q96FV2 425 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 PPP1R16AQ96I34 528 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 TSNARE1Q96NA8 513 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 KLHL32Q96NJ5 620 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 KLF6Q99612 283 aaPredicted RBP12.38□□□□□ -0.43
RAB5B-204ENST00000548068 TTC1Q99614 292 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 CCDC134Q9H6E4 229 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 UBE2ZQ9H832 354 aaPredicted RBP12.38□□□□□ -0.43
RAB5B-204ENST00000548068 TRPV5Q9NQA5 729 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 SNX15Q9NRS6 342 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 RAD18Q9NS91 495 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 PCMTD2Q9NV79 361 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 IL17CQ9P0M4 197 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 DCDC2Q9UHG0 476 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 APPL1Q9UKG1 709 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 ANKRD6Q9Y2G4 727 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 SLC30A1Q9Y6M5 507 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 WASF2Q9Y6W5 498 aa12.38□□□□□ -0.43
RAB5B-204ENST00000548068 FAM95CA0A1B0GW59 222 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 UPK3BL1B0FP48 263 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 UPK3BL2E5RIL1 263 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 H3BQ06 376 aaPredicted RBP12.37□□□□□ -0.43
RAB5B-204ENST00000548068 AURKAO14965 403 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 BUD23O43709 281 aaKnown RBP12.37□□□□□ -0.43
RAB5B-204ENST00000548068 LEFTY1O75610 366 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 ALPIP09923 528 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 CRABP2P29373 138 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 CRHR1P34998 444 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 RPA3P35244 121 aaPredicted RBP12.37□□□□□ -0.43
RAB5B-204ENST00000548068 TTPAP49638 278 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 SUOXP51687 545 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 STC1P52823 247 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 MPP1Q00013 466 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 ELAVL3Q14576 367 aaKnown RBP12.37□□□□□ -0.43
RAB5B-204ENST00000548068 USP10Q14694 798 aaKnown RBP12.37□□□□□ -0.43
RAB5B-204ENST00000548068 TYSND1Q2T9J0 566 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 STK40Q8N2I9 435 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 CBARPQ8N350 705 aaPredicted RBP12.37□□□□□ -0.43
RAB5B-204ENST00000548068 ST13P5Q8NFI4 369 aaPredicted RBP12.37□□□□□ -0.43
RAB5B-204ENST00000548068 TTC8Q8TAM2 541 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 DENND1AQ8TEH3 1009 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 DNASE1L2Q92874 299 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 ATXN7L3BQ96GX2 97 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 ELMO2Q96JJ3 720 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 P2RY13Q9BPV8 354 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 C8orf33Q9H7E9 229 aaPredicted RBP12.37□□□□□ -0.43
RAB5B-204ENST00000548068 FBXO6Q9NRD1 293 aaPredicted RBP12.37□□□□□ -0.43
RAB5B-204ENST00000548068 THAP10Q9P2Z0 257 aaPredicted RBP12.37□□□□□ -0.43
RAB5B-204ENST00000548068 TLK1Q9UKI8 766 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 SLC39A10Q9ULF5 831 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 GRID1Q9ULK0 1009 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 MTO1Q9Y2Z2 717 aaKnown RBP12.37□□□□□ -0.43
RAB5B-204ENST00000548068 COL4A2P08572 1712 aa12.37□□□□□ -0.43
RAB5B-204ENST00000548068 GRXCR2A6NFK2 248 aa12.36□□□□□ -0.43
RAB5B-204ENST00000548068 C1QTNF3-AMACRE9PGA6 284 aa12.36□□□□□ -0.43
RAB5B-204ENST00000548068 CCL22O00626 93 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms