RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 OR52K1Q8NGK4 314 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 PSMA8Q8TAA3 256 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 EGFL8Q99944 293 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 PORCNQ9H237 461 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 DMAC2Q9NW81 257 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 CRIM1Q9NZV1 1036 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 LGALS13Q9UHV8 139 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 TEKT2Q9UIF3 430 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 CROTQ9UKG9 612 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 OGDHLQ9ULD0 1010 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 RPL26L1Q9UNX3 145 aaKnown RBP5.5□□□□□ -1.53
LIMA1-203ENST00000547825 MYO15AQ9UKN7 3530 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 RGSL1A5PLK6 1076 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 PEX10O60683 326 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 PSMD10O75832 226 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 CLIC3O95833 236 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 CYBAP13498 195 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 ALOX12P18054 663 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 ITGB5P18084 799 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 HLA-DPA1P20036 260 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 LRPAP1P30533 357 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 ENTPD1P49961 510 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 PSME3P61289 254 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 DLG2Q15700 870 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 HSF5Q4G112 596 aaPredicted RBP5.5□□□□□ -1.53
LIMA1-203ENST00000547825 FBXO48Q5FWF7 155 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 PPM1LQ5SGD2 360 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 RNASEH2BQ5TBB1 312 aaKnown RBP5.5□□□□□ -1.53
LIMA1-203ENST00000547825 SLC9A4Q6AI14 798 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 ARMCX2Q7L311 632 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 WFDC8Q8IUA0 241 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 DSELQ8IZU8 1212 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 OR8H2Q8N162 312 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 BANPQ8N9N5 519 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 PPP1R13LQ8WUF5 828 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 SLC44A1Q8WWI5 657 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 LRTOMTQ8WZ04 291 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 ULK4Q96C45 1275 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 DHRS1Q96LJ7 313 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 CCDC74BQ96LY2 380 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 ZBTB18Q99592 522 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 MARCH7Q9H992 704 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 EML4Q9HC35 981 aaKnown RBP5.5□□□□□ -1.53
LIMA1-203ENST00000547825 MRGBPQ9NV56 204 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 NCKIPSDQ9NZQ3 722 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 PNMA8BQ9ULN7 279 aaPredicted RBP5.5□□□□□ -1.53
LIMA1-203ENST00000547825 STAP1Q9ULZ2 295 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 DMTF1Q9Y222 760 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 CXorf49A8MYA2 514 aaPredicted RBP5.5□□□□□ -1.53
LIMA1-203ENST00000547825 F8W8V4 182 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 GPR39O43194 453 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 BUD23O43709 281 aaKnown RBP5.5□□□□□ -1.53
LIMA1-203ENST00000547825 CCNT2O60583 730 aaKnown RBP5.5□□□□□ -1.53
LIMA1-203ENST00000547825 MAGEC1O60732 1142 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 HUS1O60921 280 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 CRTAMO95727 393 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 CST3P01034 146 aaPredicted RBP5.5□□□□□ -1.53
LIMA1-203ENST00000547825 TNFSF9P41273 254 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 GRIA1P42261 906 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 STT3AP46977 705 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 SLC7A2P52569 658 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 KCNK10P57789 538 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 ID3Q02535 119 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 BNIP3Q12983 259 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 UGCGQ16739 394 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 CCDC142Q17RM4 750 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 OGFOD2Q6N063 350 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 GALNT18Q6P9A2 607 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 MOXD1Q6UVY6 613 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 TAS2R42Q7RTR8 314 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 C11orf74Q86VG3 221 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 HID1Q8IV36 788 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 CNTD1Q8N815 330 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 TMEM145Q8NBT3 493 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 TRAPPC12Q8WVT3 735 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 LZICQ8WZA0 190 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 ISL2Q96A47 359 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 COQ7Q99807 217 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 C17orf80Q9BSJ5 609 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 TBCDQ9BTW9 1192 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 COQ10BQ9H8M1 238 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 ATAD3AQ9NVI7 634 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 BLOC1S6Q9UL45 172 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 PCDHA9Q9Y5H5 950 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 KNL1Q8NG31 2342 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 RANBP2P49792 3224 aaKnown RBP5.5□□□□□ -1.53
LIMA1-203ENST00000547825 SUPT3HB4E1H0 165 aa5.49□□□□□ -1.53
LIMA1-203ENST00000547825 PDLIM1O00151 329 aa5.49□□□□□ -1.53
LIMA1-203ENST00000547825 PSMD12O00232 456 aaPredicted RBP5.49□□□□□ -1.53
LIMA1-203ENST00000547825 RNF103O00237 685 aa5.49□□□□□ -1.53
LIMA1-203ENST00000547825 PAPSS1O43252 624 aaPredicted RBP5.49□□□□□ -1.53
LIMA1-203ENST00000547825 WDR47O94967 919 aa5.49□□□□□ -1.53
LIMA1-203ENST00000547825 ASLP04424 464 aa5.49□□□□□ -1.53
LIMA1-203ENST00000547825 XRCC1P18887 633 aaPredicted RBP5.49□□□□□ -1.53
LIMA1-203ENST00000547825 RPL14P50914 215 aaKnown RBP5.49□□□□□ -1.53
LIMA1-203ENST00000547825 KCTD2Q14681 263 aa5.49□□□□□ -1.53
LIMA1-203ENST00000547825 PAGE2BQ5JRK9 111 aa5.49□□□□□ -1.53
LIMA1-203ENST00000547825 ATF7IP2Q5U623 682 aa5.49□□□□□ -1.53
LIMA1-203ENST00000547825 IQSEC1Q6DN90 963 aa5.49□□□□□ -1.53
LIMA1-203ENST00000547825 ZFP1Q6P2D0 407 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms