RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 STK19P49842 368 aaPredicted RBP12.73□□□□□ -0.37
SCAF11-209ENST00000547018 ART3Q13508 389 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 KIF19Q2TAC6 998 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 ADGRF1Q5T601 910 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 MRNIPQ6NTE8 343 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 SPRED2Q7Z698 418 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 CLEC14AQ86T13 490 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 ZNF366Q8N895 744 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 PTERQ96BW5 349 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 SLC39A3Q9BRY0 314 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 TUBB6Q9BUF5 446 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 NSMCE4AQ9NXX6 385 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 RAP2CQ9Y3L5 183 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 BTN3A1O00481 513 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 RFPL2O75678 378 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 CRABP2P29373 138 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 MC4RP32245 332 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 TUBB3Q13509 450 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 RIPK1Q13546 671 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 ARTNQ5T4W7 220 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 SMYD5Q6GMV2 418 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 PSAPL1Q6NUJ1 521 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 RBM23Q86U06 439 aaKnown RBP12.73□□□□□ -0.37
SCAF11-209ENST00000547018 LSMEM2Q8N112 164 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 SLC43A3Q8NBI5 491 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 MDGA1Q8NFP4 955 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 ZNF570Q96NI8 536 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 MID1IP1Q9NPA3 183 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 VPS45Q9NRW7 570 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 POLR3BQ9NW08 1133 aaPredicted RBP12.73□□□□□ -0.37
SCAF11-209ENST00000547018 PPM1HQ9ULR3 514 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 CDC7O00311 574 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 TRIM24O15164 1050 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 TRIM16O95361 564 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 PIK3R1P27986 724 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 AGTR2P50052 363 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 EPHB3P54753 998 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 TSNQ15631 228 aaKnown RBP12.73□□□□□ -0.37
SCAF11-209ENST00000547018 ZRSR2Q15696 482 aaKnown RBP12.73□□□□□ -0.37
SCAF11-209ENST00000547018 CMTM8Q8IZV2 173 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 SIDT2Q8NBJ9 832 aaKnown RBP12.73□□□□□ -0.37
SCAF11-209ENST00000547018 APOL5Q9BWW9 433 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 PIF1Q9H611 641 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 MRPL17Q9NRX2 175 aaKnown RBP12.73□□□□□ -0.37
SCAF11-209ENST00000547018 MTRRQ9UBK8 725 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 CIDEBQ9UHD4 219 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 LNPEPQ9UIQ6 1025 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.73□□□□□ -0.37
SCAF11-209ENST00000547018 KATNA1O75449 491 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 NDST3O95803 873 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 PIK3CGP48736 1102 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 POU4F1Q01851 419 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 PRKAA1Q13131 559 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 KRT72Q14CN4 511 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 AGKQ53H12 422 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 ZNF549Q6P9A3 640 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 TMEM151AQ8N4L1 468 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 CDK15Q96Q40 435 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 MRPL57Q9BQC6 102 aaKnown RBP12.72□□□□□ -0.37
SCAF11-209ENST00000547018 DRC3Q9H069 523 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 DCLRE1BQ9H816 532 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 TYW5A2RUC4 315 aaKnown RBP12.72□□□□□ -0.37
SCAF11-209ENST00000547018 C2orf81A6NN90 581 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 H3BMM5 538 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 NRG2O14511 850 aaPredicted RBP12.72□□□□□ -0.37
SCAF11-209ENST00000547018 GRID2O43424 1007 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 YBEYP58557 167 aaPredicted RBP12.72□□□□□ -0.37
SCAF11-209ENST00000547018 TRAF2Q12933 501 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 AFMIDQ63HM1 303 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 EPGNQ6UW88 154 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 BEND5Q7L4P6 421 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 BBS7Q8IWZ6 715 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 SCML4Q8N228 414 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 CMTM5Q96DZ9 223 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 GPR78Q96P69 363 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 SLC30A3Q99726 388 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 DDX50Q9BQ39 737 aaKnown RBP12.72□□□□□ -0.37
SCAF11-209ENST00000547018 CWH43Q9H720 699 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 IGSF5Q9NSI5 407 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 RNF112Q9ULX5 631 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 SH3BP1Q9Y3L3 701 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 CHD9Q3L8U1 2897 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 NPEPPSL1A6NEC2 478 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 MATN2O00339 956 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 ZNF195O14628 629 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 IPO13O94829 963 aaKnown RBP12.72□□□□□ -0.37
SCAF11-209ENST00000547018 LINC00032P0C843 101 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 ATP5F1P24539 256 aaPredicted RBP12.72□□□□□ -0.37
SCAF11-209ENST00000547018 C1QTNF8P60827 252 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 PLPP4Q5VZY2 271 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 LPCAT4Q643R3 524 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 CUZD1Q86UP6 607 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 GRIN3AQ8TCU5 1115 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 CERS4Q9HA82 394 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 MID2Q9UJV3 735 aa12.72□□□□□ -0.37
SCAF11-209ENST00000547018 A0A1B0GVM2 712 aa12.71□□□□□ -0.37
SCAF11-209ENST00000547018 TCAF2A6NFQ2 919 aa12.71□□□□□ -0.37
SCAF11-209ENST00000547018 CLDN11O75508 207 aa12.71□□□□□ -0.37
SCAF11-209ENST00000547018 CES1P23141 567 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms