RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 AK4P27144 223 aaPredicted RBP14.48□□□□□ -0.09
USP15-206ENST00000546718 UGT1A3P35503 534 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 PAPOLAP51003 745 aaKnown RBP14.48□□□□□ -0.09
USP15-206ENST00000546718 NDST2P52849 883 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 POLR2FP61218 127 aaKnown RBP14.48□□□□□ -0.09
USP15-206ENST00000546718 RPL7AP62424 266 aaKnown RBP14.48□□□□□ -0.09
USP15-206ENST00000546718 KCNAB2Q13303 367 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 SKIDA1Q1XH10 827 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 CLEC16AQ2KHT3 1053 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 TCP11X2Q5H9J9 407 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 HEATR4Q86WZ0 1026 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 LURAP1LQ8IV03 231 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 ZDHHC1Q8WTX9 485 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 COQ10AQ96MF6 247 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 MCEEQ96PE7 176 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 TAAR9Q96RI9 348 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 SLC39A8Q9C0K1 460 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 FAM207AQ9NSI2 230 aaPredicted RBP14.48□□□□□ -0.09
USP15-206ENST00000546718 GPATCH2LQ9NWQ4 482 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 TAB2Q9NYJ8 693 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 AKAP7Q9P0M2 348 aaPredicted RBP14.48□□□□□ -0.09
USP15-206ENST00000546718 TMEM9Q9P0T7 183 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 TAAR2Q9P1P5 351 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 B4GALT6Q9UBX8 382 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 B3GALT1Q9Y5Z6 326 aa14.48□□□□□ -0.09
USP15-206ENST00000546718 SPTAN1Q13813 2472 aaKnown RBP14.47□□□□□ -0.09
USP15-206ENST00000546718 CLEC18AA5D8T8 446 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 RHPN2P1A8MT19 583 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 PALMO75781 387 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 ERCC5P28715 1186 aaPredicted RBP14.47□□□□□ -0.09
USP15-206ENST00000546718 ATP1A2P50993 1020 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 LIMK2P53671 638 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 AIF1P55008 147 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 TPI1P60174 286 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 OGDHQ02218 1023 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 BCL2L1Q07817 233 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 ILF3Q12906 894 aaKnown RBP eCLIP14.47□□□□□ -0.09
USP15-206ENST00000546718 BECN1Q14457 450 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 ACOX1Q15067 660 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 CLPPQ16740 277 aaPredicted RBP14.47□□□□□ -0.09
USP15-206ENST00000546718 TSR1Q2NL82 804 aaKnown RBP14.47□□□□□ -0.09
USP15-206ENST00000546718 PPP1R15BQ5SWA1 713 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 NKAIN2Q5VXU1 208 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 SLC30A9Q6PML9 568 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 CLEC18BQ6UXF7 455 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 ARHGAP36Q6ZRI8 547 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 ARHGAP12Q8IWW6 846 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 NAGSQ8N159 534 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 NPWQ8N729 165 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 CLEC18CQ8NCF0 446 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 ART4Q93070 314 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 NUS1Q96E22 293 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 CNPY3Q9BT09 278 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 TEX101Q9BY14 249 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 FRMD8Q9BZ67 464 aaPredicted RBP14.47□□□□□ -0.09
USP15-206ENST00000546718 NLRC4Q9NPP4 1024 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 TUBD1Q9UJT1 453 aa14.47□□□□□ -0.09
USP15-206ENST00000546718 UNC79Q9P2D8 2635 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 IGHV1OR21-1A0A087WYE8 117 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 PPM1DO15297 605 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 CALB1P05937 261 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 THRAP10827 490 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 MPSTP25325 297 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 EEF1GP26641 437 aaKnown RBP14.46□□□□□ -0.09
USP15-206ENST00000546718 GPR3P46089 330 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 UBE2HP62256 183 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 FOXK1P85037 733 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 CNGA3Q16281 694 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 CA9Q16790 459 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 DNAJC24Q6P3W2 148 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 IL22RA1Q8N6P7 574 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 AGBL5Q8NDL9 886 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 OR4D9Q8NGE8 314 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 SPOCK2Q92563 424 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 DDA1Q9BW61 102 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 CINPQ9BW66 212 aaPredicted RBP14.46□□□□□ -0.09
USP15-206ENST00000546718 GSDMCQ9BYG8 508 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 CDH19Q9H159 772 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 VPS16Q9H269 839 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 TRNAU1APQ9NX07 287 aaKnown RBP14.46□□□□□ -0.09
USP15-206ENST00000546718 SUFUQ9UMX1 484 aa14.46□□□□□ -0.09
USP15-206ENST00000546718 TTC24A2A3L6 582 aaPredicted RBP14.45□□□□□ -0.1
USP15-206ENST00000546718 ARHGAP42A6NI28 874 aa14.45□□□□□ -0.1
USP15-206ENST00000546718 PDE2AO00408 941 aaPredicted RBP14.45□□□□□ -0.1
USP15-206ENST00000546718 LHCGRP22888 699 aa14.45□□□□□ -0.1
USP15-206ENST00000546718 HTR7P34969 479 aa14.45□□□□□ -0.1
USP15-206ENST00000546718 CASRP41180 1078 aa14.45□□□□□ -0.1
USP15-206ENST00000546718 GNPDA1P46926 289 aa14.45□□□□□ -0.1
USP15-206ENST00000546718 POLD2P49005 469 aa14.45□□□□□ -0.1
USP15-206ENST00000546718 POLR2LP62875 67 aaKnown RBP14.45□□□□□ -0.1
USP15-206ENST00000546718 CDK3Q00526 305 aa14.45□□□□□ -0.1
USP15-206ENST00000546718 CTBSQ01459 385 aa14.45□□□□□ -0.1
USP15-206ENST00000546718 NSUN2Q08J23 767 aaKnown RBP eCLIP14.45□□□□□ -0.1
USP15-206ENST00000546718 TRA2AQ13595 282 aaKnown RBP eCLIP14.45□□□□□ -0.1
USP15-206ENST00000546718 UBAP2LQ14157 1087 aaKnown RBP14.45□□□□□ -0.1
USP15-206ENST00000546718 IGFBP7Q16270 282 aa14.45□□□□□ -0.1
USP15-206ENST00000546718 CACNA2D3Q8IZS8 1091 aa14.45□□□□□ -0.1
USP15-206ENST00000546718 BMPERQ8N8U9 685 aa14.45□□□□□ -0.1
USP15-206ENST00000546718 PHPT1Q9NRX4 125 aaPredicted RBP14.45□□□□□ -0.1
USP15-206ENST00000546718 OCIAD1Q9NX40 245 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms