RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 CBX6O95503 412 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 PENKP01210 267 aaPredicted RBP15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 PRSS56P0CW18 603 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 TCF3P15923 654 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 TARSP26639 723 aaKnown RBP15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 ABL2P42684 1182 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 GRIA4P48058 902 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 KCNJ2P63252 427 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 ZBTB16Q05516 673 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 SLC20A2Q08357 652 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 CSHL1Q14406 222 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 PTPRRQ15256 657 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 SLC5A9Q2M3M2 681 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 PITRM1Q5JRX3 1037 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 AGAP9Q5VTM2 703 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 SDCCAG8Q86SQ7 713 aaPredicted RBP15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 METTL3Q86U44 580 aaKnown RBP15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 LEMD2Q8NC56 503 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 ANKRD49Q8WVL7 239 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 INPP5DQ92835 1189 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 PTCD3Q96EY7 689 aaKnown RBP15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 MYO19Q96H55 970 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 TCF12Q99081 682 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 EBF4Q9BQW3 602 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 TUBB6Q9BUF5 446 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 NMUR2Q9GZQ4 415 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 MCOLN1Q9GZU1 580 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 CDH19Q9H159 772 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 LRMDAQ9H2I8 198 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 POPDC3Q9HBV1 291 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 ARL8BQ9NVJ2 186 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 POLR3BQ9NW08 1133 aaPredicted RBP15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 EVLQ9UI08 416 aaPredicted RBP15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 LNPEPQ9UIQ6 1025 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 HAO1Q9UJM8 370 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 CRYL1Q9Y2S2 319 aa15.25■□□□□ 0.03
CALCOCO1-203ENST00000546443 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 H7C0S8 307 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 TRAFD1O14545 582 aaPredicted RBP15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 HTRA2O43464 458 aaPredicted RBP15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 HNRNPCL1O60812 293 aaKnown RBP15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 HSPA4LO95757 839 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 POU2F2P09086 479 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 CCDC166P0CW27 439 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 MYOGP15173 224 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 DNAJB13P59910 316 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 RPL26P61254 145 aaKnown RBP15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 ELF3P78545 371 aaPredicted RBP15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 USP4Q13107 963 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 RCN2Q14257 317 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 ACAP2Q15057 778 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 ZNF77Q15935 545 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 FAM83EQ2M2I3 478 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 ASTLQ6HA08 431 aaPredicted RBP15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 TTC7BQ86TV6 843 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 EFHBQ8N7U6 833 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 ZNF781Q8N8C0 355 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 MICAL1Q8TDZ2 1067 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 PDCD6IPQ8WUM4 868 aaKnown RBP15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 LPGAT1Q92604 370 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 VOPP1Q96AW1 172 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 TM6SF2Q9BZW4 377 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 MTIF3Q9H2K0 278 aaKnown RBP15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 MAGEE1Q9HCI5 957 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 GPAMQ9HCL2 828 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 TDP1Q9NUW8 608 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 FKBPLQ9UIM3 349 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 RPL26L1Q9UNX3 145 aaKnown RBP15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 ZNF711Q9Y462 761 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 PCDHB9Q9Y5E1 797 aa15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 NUP210Q8TEM1 1887 aaPredicted RBP15.24■□□□□ 0.03
CALCOCO1-203ENST00000546443 CAPN14A8MX76 684 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 CCDC22O60826 627 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 RBP1P09455 135 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 ATP5F1P24539 256 aaPredicted RBP15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 MAPK8P45983 427 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 IDH3AP50213 366 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 NTHL1P78549 312 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 ASPHQ12797 758 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 PEX6Q13608 980 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 DGKKQ5KSL6 1271 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 ARMC12Q5T9G4 340 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 PACS2Q86VP3 889 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 TMEM25Q86YD3 366 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 LSMEM2Q8N112 164 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 KIF2BQ8N4N8 673 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 TXNDC5Q8NBS9 432 aaKnown RBP15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 NSL1Q96IY1 281 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 TMEM237Q96Q45 408 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 UNKQ9C0B0 810 aaKnown RBP15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 IL17CQ9P0M4 197 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 RAP2CQ9Y3L5 183 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 MTF2Q9Y483 593 aaPredicted RBP15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 MYOFQ9NZM1 2061 aa15.23■□□□□ 0.03
CALCOCO1-203ENST00000546443 STX7O15400 261 aaKnown RBP15.22■□□□□ 0.03
CALCOCO1-203ENST00000546443 NPHS1O60500 1241 aa15.22■□□□□ 0.03
CALCOCO1-203ENST00000546443 SOCS5O75159 536 aa15.22■□□□□ 0.03
CALCOCO1-203ENST00000546443 XYLBO75191 536 aa15.22■□□□□ 0.03
CALCOCO1-203ENST00000546443 PRAMEF12O95522 483 aa15.22■□□□□ 0.03
CALCOCO1-203ENST00000546443 IGSF6O95976 241 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms