RNA–Protein interactions for RNA: ENST00000546202.5

PPP1CA-211, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 4

Gene PPP1CA, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-211ENST00000546202 CCNJLQ8IV13 435 aa16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 ZBED8Q8IZ13 594 aa16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 CBARPQ8N350 705 aaPredicted RBP16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 GANCQ8TET4 914 aa16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 AENQ8WTP8 325 aaKnown RBP16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 PEX13Q92968 403 aa16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 EID2BQ96D98 161 aa16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 C19orf43Q9BQ61 176 aa16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 TXLNGYQ9BZA5 131 aa16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 GPR63Q9BZJ6 419 aa16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 IRF2BPLQ9H1B7 796 aa16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 ZFYVE1Q9HBF4 777 aa16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 CD93Q9NPY3 652 aa16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 CHRAC1Q9NRG0 131 aa16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 SPATA6Q9NWH7 488 aaPredicted RBP16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 SAMD15Q9P1V8 674 aa16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 GGT7Q9UJ14 662 aa16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 ITM2BQ9Y287 266 aa16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 ARL5AQ9Y689 179 aa16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 PLXNA2O75051 1894 aa16.31■□□□□ 0.2
PPP1CA-211ENST00000546202 NUMA1Q14980 2115 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 A0A0U1RQS6 177 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 FAM237BA0A1B0GVD1 139 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 A8MX80 341 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 TSPAN6O43657 245 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 CLDN7O95471 211 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 LPOP22079 712 aaPredicted RBP16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 HMGCLP35914 325 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 ZNF140P52738 457 aaPredicted RBP16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 STC1P52823 247 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 ADPRHP54922 357 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 PDE1BQ01064 536 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 PTSQ03393 145 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 SEPT6Q14141 434 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 SLMAPQ14BN4 828 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 BRD3Q15059 726 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 CNGA3Q16281 694 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 HP1BP3Q5SSJ5 553 aaPredicted RBP16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 TSTD2Q5T7W7 516 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 CASC4Q6P4E1 433 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 EMBQ6PCB8 327 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 LIPIQ6XZB0 460 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 TMEM135Q86UB9 458 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 ANKMY2Q8IV38 441 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 FBXO36Q8NEA4 188 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 KDM4CQ9H3R0 1056 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 IL17CQ9P0M4 197 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 CHMP2BQ9UQN3 213 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 KCTD3Q9Y597 815 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 MAD1L1Q9Y6D9 718 aa16.3■□□□□ 0.2
PPP1CA-211ENST00000546202 TRPM6Q9BX84 2022 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 CACNA1IQ9P0X4 2223 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 C2orf81A6NN90 581 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 C10orf142B7Z368 130 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 PSMD11O00231 422 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 ZNF217O75362 1048 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 C1SP09871 688 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 TDGF1P13385 188 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 PGAM1P18669 254 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 LIG3P49916 1009 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 ACVR1Q04771 509 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 ARHGEF7Q14155 803 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 STEAP4Q687X5 459 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 RAVER1Q8IY67 606 aaKnown RBP16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 DTWD2Q8NBA8 298 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 OR14C36Q8NHC7 312 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 PYROXD1Q8WU10 500 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 STYXQ8WUJ0 223 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 CAVIN3Q969G5 261 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 ZNF778Q96MU6 729 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 TRIM56Q9BRZ2 755 aaKnown RBP16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 PLAC1Q9HBJ0 212 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 SGK2Q9HBY8 427 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 PREBQ9HCU5 417 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 TREX1Q9NSU2 369 aa16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 NLE1Q9NVX2 485 aaPredicted RBP16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 ZC3H7BQ9UGR2 993 aaKnown RBP16.29■□□□□ 0.2
PPP1CA-211ENST00000546202 DOCK9Q9BZ29 2069 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 CCDC163A0A0D9SF12 145 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 CCDC151A5D8V7 595 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 NEMP1O14524 444 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 GALR2O43603 387 aaPredicted RBP16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 USP1O94782 785 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 TTC4O95801 387 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 POLBP06746 335 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 ELFN1P0C7U0 828 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 TSHRP16473 764 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 NMBRP28336 390 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 OXTRP30559 389 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 CREB5Q02930 508 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 SKIDA1Q1XH10 827 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 MAP9Q49MG5 647 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 ANKRD20A4Q4UJ75 823 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 NEK5Q6P3R8 708 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 HSD11B1LQ7Z5J1 315 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 FAM124AQ86V42 546 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 OR4K2Q8NGD2 314 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 OR13C4Q8NGS5 318 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 OR13J1Q8NGT2 312 aa16.28■□□□□ 0.2
PPP1CA-211ENST00000546202 MFSD3Q96ES6 412 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms