RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 RNF14Q9UBS8 474 aa17.5■□□□□ 0.39
CD9-211ENST00000546073 TTC7AQ9ULT0 858 aaPredicted RBP17.5■□□□□ 0.39
CD9-211ENST00000546073 PKP3Q9Y446 797 aa17.5■□□□□ 0.39
CD9-211ENST00000546073 EML5Q05BV3 1969 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 A0A1W2PR77 199 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 C2orf81A6NN90 581 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 USP27XA6NNY8 438 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 AP3B1O00203 1094 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 CLDN7O95471 211 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 CRTAMO95727 393 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 SLC4A1P02730 911 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 ZNF883P0CG24 379 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 CTSKP43235 329 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 GPR1P46091 355 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 HNRNPKP61978 463 aaKnown RBP eCLIP17.49■□□□□ 0.39
CD9-211ENST00000546073 SARNPP82979 210 aaKnown RBP17.49■□□□□ 0.39
CD9-211ENST00000546073 RALGDSQ12967 914 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 LAMB3Q13751 1172 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 INPP5AQ14642 412 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 IRF4Q15306 451 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 SLC1A5Q15758 541 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 RSPO4Q2I0M5 234 aaPredicted RBP17.49■□□□□ 0.39
CD9-211ENST00000546073 RAET1GQ6H3X3 334 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 PPP1R21Q6ZMI0 780 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 OR13H1Q8NG92 308 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 AP2M1Q96CW1 435 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 RUNDC3BQ96NL0 473 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 LYSMD1Q96S90 227 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 TBL1YQ9BQ87 522 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 WDR26Q9H7D7 661 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 FSCN3Q9NQT6 498 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 KCND1Q9NSA2 647 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 DNAAF2Q9NVR5 837 aaKnown RBP17.49■□□□□ 0.39
CD9-211ENST00000546073 SPAG17Q6Q759 2223 aa17.49■□□□□ 0.39
CD9-211ENST00000546073 LOC285095A0A1B0GVY8 99 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 NEMP2A6NFY4 417 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 SPINT1O43278 529 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 GDF9O60383 454 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 ALPPL2P10696 532 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 CTSEP14091 401 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 ETV3P41162 512 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 FGL2Q14314 439 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 PUM1Q14671 1186 aaKnown RBP eCLIP17.48■□□□□ 0.39
CD9-211ENST00000546073 WSCD2Q2TBF2 565 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 LAYNQ6UX15 382 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 GCNT7Q6ZNI0 430 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 GLT6D1Q7Z4J2 308 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 PARGQ86W56 976 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 DNAAF3Q8N9W5 541 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 TP53I13Q8NBR0 393 aaPredicted RBP17.48■□□□□ 0.39
CD9-211ENST00000546073 BLOC1S5Q8TDH9 187 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 SETD7Q8WTS6 366 aaKnown RBP17.48■□□□□ 0.39
CD9-211ENST00000546073 VOPP1Q96AW1 172 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 TADA1Q96BN2 335 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 DTD2Q96FN9 168 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 MRGPRX2Q96LB1 330 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 BMFQ96LC9 184 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 COQ10AQ96MF6 247 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 NSMCE3Q96MG7 304 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 APOOQ9BUR5 198 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 SLC13A1Q9BZW2 595 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 FAM83DQ9H4H8 585 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 RAB6BQ9NRW1 208 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 EVA1BQ9NVM1 165 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 DNAJC28Q9NX36 388 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 MOSPD1Q9UJG1 213 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 SHOC2Q9UQ13 582 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 CA5BQ9Y2D0 317 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 PCDHGB2Q9Y5G2 931 aa17.48■□□□□ 0.39
CD9-211ENST00000546073 SDK1Q7Z5N4 2213 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 POM121BA6NF01 834 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 SLC30A4O14863 429 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 RAD51BO15315 384 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 PPFIA2O75334 1257 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 PRLP01236 227 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 TUBB4AP04350 444 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 WNT1P04628 370 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 STC1P52823 247 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 PPARDQ03181 441 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 PTSQ03393 145 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 OASLQ15646 514 aaKnown RBP17.47■□□□□ 0.39
CD9-211ENST00000546073 ZNF423Q2M1K9 1284 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 SIRPB2Q5JXA9 342 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 FAXCQ5TGI0 409 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 ESRP1Q6NXG1 681 aaKnown RBP17.47■□□□□ 0.39
CD9-211ENST00000546073 PNCKQ6P2M8 343 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 KDELC1Q6UW63 502 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 Q6ZVL8 140 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 ZNF765Q7L2R6 523 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 HSD11B1LQ7Z5J1 315 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 TSPAN33Q86UF1 283 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 RTP4Q96DX8 246 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 OXNAD1Q96HP4 312 aaPredicted RBP17.47■□□□□ 0.39
CD9-211ENST00000546073 MS4A14Q96JA4 679 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 TRIB3Q96RU7 358 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 KLF6Q99612 283 aaPredicted RBP17.47■□□□□ 0.39
CD9-211ENST00000546073 AP1M1Q9BXS5 423 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 DOLKQ9UPQ8 538 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 ZNF711Q9Y462 761 aa17.47■□□□□ 0.39
CD9-211ENST00000546073 SHROOM3Q8TF72 1996 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms