RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 CTF1Q16619 201 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 EIF2S3LQ2VIR3 472 aaKnown RBP4.65□□□□□ -1.67
SNHG1-224ENST00000545688 CEP85LQ5SZL2 805 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 ADAM5Q6NVV9 412 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 KRBA2Q6ZNG9 492 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 DSG4Q86SJ6 1040 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 TMTC1Q8IUR5 882 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 CHERPQ8IWX8 916 aaKnown RBP4.65□□□□□ -1.67
SNHG1-224ENST00000545688 DSELQ8IZU8 1212 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 BBS10Q8TAM1 723 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 HEMGNQ9BXL5 484 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 MKKSQ9NPJ1 570 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-224ENST00000545688 COMMD10Q9Y6G5 202 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 STON1Q9Y6Q2 735 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 PDS5AQ29RF7 1337 aaKnown RBP4.65□□□□□ -1.67
SNHG1-224ENST00000545688 GRIN2BQ13224 1484 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 GOLGA6L10A0A0M3HER8 536 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 TEX22C9J3V5 150 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 TACC1O75410 805 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 GALTP07902 379 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 KRTAP10-5P60370 271 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 SEC61BP60468 96 aaKnown RBP4.64□□□□□ -1.67
SNHG1-224ENST00000545688 BIRC2Q13490 618 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 TMEM81Q6P7N7 255 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 SLC36A4Q6YBV0 504 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 LDHAL6AQ6ZMR3 332 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 DHX40Q8IX18 779 aaKnown RBP4.64□□□□□ -1.67
SNHG1-224ENST00000545688 KLHDC8BQ8IXV7 354 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 SLC35F3Q8IY50 421 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 BEST2Q8NFU1 509 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 ISCA1Q9BUE6 129 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 KCNN2Q9H2S1 579 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 PCDH9Q9HC56 1237 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 MAGEE1Q9HCI5 957 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 FBRSL1Q9HCM7 1045 aaKnown RBP4.64□□□□□ -1.67
SNHG1-224ENST00000545688 ZNF334Q9HCZ1 680 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-224ENST00000545688 KLHL1Q9NR64 748 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 ABCF3Q9NUQ8 709 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 HSPB7Q9UBY9 170 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 GAB2Q9UQC2 676 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 NOTCH3Q9UM47 2321 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 ERCC6L2Q5T890 1561 aa4.64□□□□□ -1.67
SNHG1-224ENST00000545688 PRDM2Q13029 1718 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 ABCC10Q5T3U5 1492 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 MT-CYBP00156 380 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-224ENST00000545688 TMPOP42166 694 aaKnown RBP4.63□□□□□ -1.67
SNHG1-224ENST00000545688 CCR5P51681 352 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 UBE3AQ05086 875 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 NFIL3Q16649 462 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 TCTN1Q2MV58 587 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 GRAMD1BQ3KR37 738 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 ZNF766Q5HY98 468 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 IRAK1BP1Q5VVH5 260 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 RGMBQ6NW40 437 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 FBXO46Q6PJ61 603 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-224ENST00000545688 C19orf48Q6RUI8 117 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 SLC22A25Q6T423 547 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 GFRALQ6UXV0 394 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 TAOK1Q7L7X3 1001 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 TMEM219Q86XT9 240 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 TDRPQ86YL5 185 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 CPOQ8IVL8 374 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 ZCCHC9Q8N567 271 aaKnown RBP4.63□□□□□ -1.67
SNHG1-224ENST00000545688 C11orf65Q8NCR3 313 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 DUSP19Q8WTR2 217 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 SLC20A1Q8WUM9 679 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 WBP1Q96G27 269 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 LBHD1Q9BQE6 289 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-224ENST00000545688 TRMT61BQ9BVS5 477 aaKnown RBP4.63□□□□□ -1.67
SNHG1-224ENST00000545688 RIC8AQ9NPQ8 531 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 C20orf141Q9NUB4 165 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 MCM9Q9NXL9 1143 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 POU2F3Q9UKI9 436 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 RALYQ9UKM9 306 aaKnown RBP4.63□□□□□ -1.67
SNHG1-224ENST00000545688 GPR52Q9Y2T5 361 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 FAM96BQ9Y3D0 163 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 LSM4Q9Y4Z0 139 aaKnown RBP4.63□□□□□ -1.67
SNHG1-224ENST00000545688 NUP160Q12769 1436 aa4.63□□□□□ -1.67
SNHG1-224ENST00000545688 SMCHD1A6NHR9 2005 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 A0A1W2PS18 150 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 ASPDHA6ND91 283 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 IFNL4K9M1U5 179 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 ITGA2P17301 1181 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 SHMT1P34896 483 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 PGM1P36871 562 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 IL15P40933 162 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-224ENST00000545688 CDH15P55291 814 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 C2orf68Q2NKX9 166 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 KCNT1Q5JUK3 1230 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 LCTLQ6UWM7 567 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 LINGO2Q7L985 606 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 SLC26A9Q7LBE3 791 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 ZBTB2Q8N680 514 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 PPM1EQ8WY54 764 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 HERVK_113Q902F9 699 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 WBP2Q969T9 261 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 ZSCAN31Q96LW9 406 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-224ENST00000545688 INTS2Q9H0H0 1204 aaKnown RBP4.62□□□□□ -1.67
SNHG1-224ENST00000545688 PLEKHA5Q9HAU0 1116 aa4.62□□□□□ -1.67
SNHG1-224ENST00000545688 BPIFA1Q9NP55 256 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms