RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 CNOT1A5YKK6 2376 aaKnown RBP19.14■□□□□ 0.66
DDX55-211ENST00000544429 A0A0U1RQS6 177 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 A0A1B0GTQ1 180 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 LZTS3O60299 673 aaPredicted RBP19.14■□□□□ 0.65
DDX55-211ENST00000544429 PMPCBO75439 489 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 STK10O94804 968 aaKnown RBP19.14■□□□□ 0.65
DDX55-211ENST00000544429 CD59P13987 128 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 STIP1P31948 543 aaKnown RBP19.14■□□□□ 0.65
DDX55-211ENST00000544429 STC1P52823 247 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 ATXN3P54252 364 aaPredicted RBP19.14■□□□□ 0.65
DDX55-211ENST00000544429 EPHB1P54762 984 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 YPEL5P62699 121 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 GALNT3Q14435 633 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 PCSK7Q16549 785 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 TPRG1LQ5T0D9 272 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 FAM71DQ8N9W8 422 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 C1orf54Q8WWF1 131 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 EID2BQ96D98 161 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 IFT43Q96FT9 208 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 PBKQ96KB5 322 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 RTKNQ9BST9 563 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 MAGEE1Q9HCI5 957 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 KCTD5Q9NXV2 234 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 PCDHGB2Q9Y5G2 931 aa19.14■□□□□ 0.65
DDX55-211ENST00000544429 SPTY2D1-AS1A0A0U1RR47 76 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 CES2O00748 559 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 CEP104O60308 925 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 PCDHGA12O60330 932 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 ANXA9O76027 345 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 ITGAVP06756 1048 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 C1SP09871 688 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 MSNP26038 577 aaKnown RBP19.13■□□□□ 0.65
DDX55-211ENST00000544429 PSMB4P28070 264 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 ADRA1AP35348 466 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 TRIM23P36406 574 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 DPTQ07507 201 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 MTM1Q13496 603 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 KCTD11Q693B1 232 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 ESRP1Q6NXG1 681 aaKnown RBP19.13■□□□□ 0.65
DDX55-211ENST00000544429 KANSL1Q7Z3B3 1105 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 PIP4P1Q86T03 277 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 NLRP8Q86W28 1048 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 OXR1Q8N573 874 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 PLA2G15Q8NCC3 412 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 MAIP1Q8WWC4 291 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 SNX12Q9UMY4 172 aa19.13■□□□□ 0.65
DDX55-211ENST00000544429 TDRD6O60522 2096 aaKnown RBP19.12■□□□□ 0.65
DDX55-211ENST00000544429 ETV3P41162 512 aa19.12■□□□□ 0.65
DDX55-211ENST00000544429 ARHGEF7Q14155 803 aa19.12■□□□□ 0.65
DDX55-211ENST00000544429 FZD2Q14332 565 aa19.12■□□□□ 0.65
DDX55-211ENST00000544429 ACOX1Q15067 660 aa19.12■□□□□ 0.65
DDX55-211ENST00000544429 SLC1A5Q15758 541 aa19.12■□□□□ 0.65
DDX55-211ENST00000544429 PARP6Q2NL67 630 aa19.12■□□□□ 0.65
DDX55-211ENST00000544429 P3H1Q32P28 736 aa19.12■□□□□ 0.65
DDX55-211ENST00000544429 SIRPB2Q5JXA9 342 aa19.12■□□□□ 0.65
DDX55-211ENST00000544429 RANBP10Q6VN20 620 aa19.12■□□□□ 0.65
DDX55-211ENST00000544429 Q6ZVL8 140 aa19.12■□□□□ 0.65
DDX55-211ENST00000544429 ZNF765Q7L2R6 523 aa19.12■□□□□ 0.65
DDX55-211ENST00000544429 PTAR1Q7Z6K3 402 aaPredicted RBP19.12■□□□□ 0.65
DDX55-211ENST00000544429 PELI3Q8N2H9 469 aa19.12■□□□□ 0.65
DDX55-211ENST00000544429 PPP1R2P1Q96PQ5 205 aa19.12■□□□□ 0.65
DDX55-211ENST00000544429 OSBPL9Q96SU4 736 aa19.12■□□□□ 0.65
DDX55-211ENST00000544429 TM7SF3Q9NS93 570 aa19.12■□□□□ 0.65
DDX55-211ENST00000544429 DRG1Q9Y295 367 aaKnown RBP19.12■□□□□ 0.65
DDX55-211ENST00000544429 AAR2Q9Y312 384 aaKnown RBP19.12■□□□□ 0.65
DDX55-211ENST00000544429 F5H423 210 aaPredicted RBP19.11■□□□□ 0.65
DDX55-211ENST00000544429 FANCGO15287 622 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 CLDN7O95471 211 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 METTL18O95568 372 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 SOD1P00441 154 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 HOXC4P09017 264 aaPredicted RBP19.11■□□□□ 0.65
DDX55-211ENST00000544429 HLA-DPA1P20036 260 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 TEAD1P28347 426 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 CHRNA4P43681 627 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 CCT8P50990 548 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 GEMP55040 296 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 INPP5AQ14642 412 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 PUM1Q14671 1186 aaKnown RBP eCLIP19.11■□□□□ 0.65
DDX55-211ENST00000544429 PRAMEF14Q5SWL7 426 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 RFLNAQ6ZTI6 216 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 KDELC2Q7Z4H8 507 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 PRELID2Q8N945 189 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 IPMKQ8NFU5 416 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 COG1Q8WTW3 980 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 NUS1Q96E22 293 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 MS4A14Q96JA4 679 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 WDR24Q96S15 920 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 PNMA8BQ9ULN7 279 aaPredicted RBP19.11■□□□□ 0.65
DDX55-211ENST00000544429 SPO11Q9Y5K1 396 aa19.11■□□□□ 0.65
DDX55-211ENST00000544429 COL5A1P20908 1838 aaPredicted RBP19.1■□□□□ 0.65
DDX55-211ENST00000544429 C1orf232A0A0U1RR37 186 aa19.1■□□□□ 0.65
DDX55-211ENST00000544429 K7ESM1 405 aa19.1■□□□□ 0.65
DDX55-211ENST00000544429 YKT6O15498 198 aa19.1■□□□□ 0.65
DDX55-211ENST00000544429 MSLNQ13421 630 aaPredicted RBP19.1■□□□□ 0.65
DDX55-211ENST00000544429 LONRF2Q1L5Z9 754 aa19.1■□□□□ 0.65
DDX55-211ENST00000544429 PAPD7Q5XG87 772 aaKnown RBP19.1■□□□□ 0.65
DDX55-211ENST00000544429 PNCKQ6P2M8 343 aa19.1■□□□□ 0.65
DDX55-211ENST00000544429 LYSMD3Q7Z3D4 306 aa19.1■□□□□ 0.65
DDX55-211ENST00000544429 TMC3Q7Z5M5 1100 aa19.1■□□□□ 0.65
DDX55-211ENST00000544429 NRSN1Q8IZ57 195 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms