RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 TIGD2Q4W5G0 525 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 ARCQ7LC44 396 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 PPP1R16AQ96I34 528 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 SEMA3CQ99985 751 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 ACAT2Q9BWD1 397 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 PRDM8Q9NQV8 689 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 BLOC1S4Q9NUP1 217 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 PCYOX1Q9UHG3 505 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 MAGEB3O15480 346 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 SERPINB7O75635 380 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 TNFRSF8P28908 595 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 PIK3C3Q8NEB9 887 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 ZNF563Q8TA94 476 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 UXTQ9UBK9 157 aaPredicted RBP15.46■□□□□ 0.07
CHD4-210ENST00000544040 ACKR2O00590 384 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 AZGP1P25311 298 aaKnown RBP15.46■□□□□ 0.07
CHD4-210ENST00000544040 ARFIP1P53367 373 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 PPCDCQ96CD2 204 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 DIRAS2Q96HU8 199 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 SLC4A9Q96Q91 983 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 CLCC1Q96S66 551 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 MT-ND1P03886 318 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 LYNP07948 512 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 IDO1P14902 403 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 ITPKBP27987 946 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 CBX5P45973 191 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 MXD1Q05195 221 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 PRKG2Q13237 762 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 SDHAF4Q5VUM1 108 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 BICRALQ6AI39 1079 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 CCDC36Q8IYA8 594 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 ARRDC4Q8NCT1 418 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 DNERQ8NFT8 737 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 TSEN15Q8WW01 171 aaKnown RBP15.46■□□□□ 0.07
CHD4-210ENST00000544040 GAD1Q99259 594 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 EXD2Q9NVH0 621 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 IKZF2Q9UKS7 526 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 FBXL21Q9UKT6 434 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 PCDHGC5Q9Y5F6 944 aa15.46■□□□□ 0.07
CHD4-210ENST00000544040 E7ENX8 843 aa15.46■□□□□ 0.06
CHD4-210ENST00000544040 HOXB8P17481 243 aaPredicted RBP15.46■□□□□ 0.06
CHD4-210ENST00000544040 FAUP35544 74 aaKnown RBP15.46■□□□□ 0.06
CHD4-210ENST00000544040 ATP5C1P36542 298 aaKnown RBP15.46■□□□□ 0.06
CHD4-210ENST00000544040 ZNF143P52747 638 aaPredicted RBP15.46■□□□□ 0.06
CHD4-210ENST00000544040 MANFP55145 182 aaKnown RBP15.46■□□□□ 0.06
CHD4-210ENST00000544040 SNRPD1P62314 119 aaKnown RBP15.46■□□□□ 0.06
CHD4-210ENST00000544040 IL17RBQ9NRM6 502 aa15.46■□□□□ 0.06
CHD4-210ENST00000544040 PSMD9O00233 223 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 RGS1Q08116 209 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 RAB43Q86YS6 212 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 HAVCR1Q96D42 359 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 DMRTB1Q96MA1 342 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 RNF157Q96PX1 679 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 AARSD1Q9BTE6 412 aaKnown RBP15.45■□□□□ 0.06
CHD4-210ENST00000544040 DKK3Q9UBP4 350 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 FAM155BO75949 473 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 MBTD1Q05BQ5 628 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 MTA1Q13330 715 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 MPPE1Q53F39 396 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 PLET1Q6UQ28 207 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 ZNF615Q8N8J6 731 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 S100A14Q9HCY8 104 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 CCNB1IP1Q9NPC3 277 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 FADS3Q9Y5Q0 445 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 FRMPD4Q14CM0 1322 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 AK9Q5TCS8 1911 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 RCCD1A6NED2 376 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 MAGEC1O60732 1142 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 UGT2B11O75310 529 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 ADRB2P07550 413 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 ALDH3A2P51648 485 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 AP1S2P56377 157 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 DGCR14Q96DF8 476 aaKnown RBP15.45■□□□□ 0.06
CHD4-210ENST00000544040 ZDHHC15Q96MV8 337 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 GRIP1Q9Y3R0 1128 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 ATF4P18848 351 aaPredicted RBP15.45■□□□□ 0.06
CHD4-210ENST00000544040 SCNN1GP51170 649 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 NT5DC1Q5TFE4 455 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.45■□□□□ 0.065e-7■■■■■ 50.8
CHD4-210ENST00000544040 ING5Q8WYH8 240 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 RTKNQ9BST9 563 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 MRPL17Q9NRX2 175 aaKnown RBP15.45■□□□□ 0.06
CHD4-210ENST00000544040 HES2Q9Y543 173 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 MDM4O15151 490 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 ITGAVP06756 1048 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 ICAM3P32942 547 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 MC1RQ01726 317 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 PEX6Q13608 980 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 MYBPC3Q14896 1274 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 KIAA1324Q6UXG2 1013 aaKnown RBP15.45■□□□□ 0.06
CHD4-210ENST00000544040 OR52J3Q8NH60 311 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 KAT2AQ92830 837 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 FEM1CQ96JP0 617 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 RAB23Q9ULC3 237 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 QRICH2Q9H0J4 1663 aa15.45■□□□□ 0.06
CHD4-210ENST00000544040 PLA2R1Q13018 1463 aa15.44■□□□□ 0.06
CHD4-210ENST00000544040 NCK1P16333 377 aa15.44■□□□□ 0.06
CHD4-210ENST00000544040 ITPKAP23677 461 aa15.44■□□□□ 0.06
CHD4-210ENST00000544040 MC4RP32245 332 aa15.44■□□□□ 0.06
CHD4-210ENST00000544040 JAZF1Q86VZ6 243 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms