RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 SEMG2Q02383 582 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 ACOX1Q15067 660 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 TMEM52BQ4KMG9 183 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 USP39Q53GS9 565 aaKnown RBP11.9□□□□□ -0.5
DDB1-223ENST00000543658 HP1BP3Q5SSJ5 553 aaPredicted RBP11.9□□□□□ -0.5
DDB1-223ENST00000543658 ZDHHC20Q5W0Z9 365 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 KIAA1161Q6NSJ0 714 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 EMBQ6PCB8 327 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 CRTC1Q6UUV9 634 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 MAMSTRQ6ZN01 415 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 TSPAN33Q86UF1 283 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 C1orf210Q8IVY1 113 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 MPP5Q8N3R9 675 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 TMEM105Q8N8V8 129 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 DTWD2Q8NBA8 298 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 VOPP1Q96AW1 172 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 EBNA1BP2Q99848 306 aaKnown RBP11.9□□□□□ -0.5
DDB1-223ENST00000543658 C1QTNF7Q9BXJ2 289 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 EPHX3Q9H6B9 360 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 PRMT8Q9NR22 394 aaPredicted RBP11.9□□□□□ -0.5
DDB1-223ENST00000543658 KCTD5Q9NXV2 234 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 SERGEFQ9UGK8 458 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 EBF1Q9UH73 591 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 RAB21Q9UL25 225 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 ARL5AQ9Y689 179 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 RPS6KL1Q9Y6S9 549 aa11.9□□□□□ -0.5
DDB1-223ENST00000543658 FAM237BA0A1B0GVD1 139 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 AREL1O15033 823 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 TP73O15350 636 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 RNGTTO60942 597 aaKnown RBP11.89□□□□□ -0.51
DDB1-223ENST00000543658 SPAG6O75602 509 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 TM7SF2O76062 418 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 USP1O94782 785 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 SEMA4FO95754 770 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 C6P13671 934 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 LHCGRP22888 699 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 HMGCLP35914 325 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 MAGEA4P43358 317 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 LIG3P49916 1009 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 RPS21P63220 83 aaKnown RBP11.89□□□□□ -0.51
DDB1-223ENST00000543658 TMPRSS15P98073 1019 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 CSTF1Q05048 431 aaKnown RBP11.89□□□□□ -0.51
DDB1-223ENST00000543658 SGCGQ13326 291 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 BRD3Q15059 726 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 CNGA3Q16281 694 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 MSS51Q4VC12 460 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 SPANXN3Q5MJ09 141 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 TSTD2Q5T7W7 516 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 NEK5Q6P3R8 708 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 LIPIQ6XZB0 460 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 SLC36A4Q6YBV0 504 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 CAPN12Q6ZSI9 719 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 OTUD6BQ8N6M0 293 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.89□□□□□ -0.51
DDB1-223ENST00000543658 OR4K2Q8NGD2 314 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 OR2T34Q8NGX1 318 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 PEX13Q92968 403 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.89□□□□□ -0.511e-8■■■■■ 55.9
DDB1-223ENST00000543658 NUS1Q96E22 293 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 SIGLEC10Q96LC7 697 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 C9orf72Q96LT7 481 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 SMIM14Q96QK8 99 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 KIFC1Q9BW19 673 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 VPS37BQ9H9H4 285 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 BPIFA1Q9NP55 256 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 CHRAC1Q9NRG0 131 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 GGT7Q9UJ14 662 aa11.89□□□□□ -0.51
DDB1-223ENST00000543658 FNDC3AQ9Y2H6 1198 aaKnown RBP11.89□□□□□ -0.51
DDB1-223ENST00000543658 CACNA1IQ9P0X4 2223 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 PLXNB3Q9ULL4 1909 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 CCDC163A0A0D9SF12 145 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 CCDC151A5D8V7 595 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 FAM86C2PA6NEL3 165 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 K7ESF4 209 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 WNT9AO14904 365 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 MAP3K13O43283 966 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 LDB2O43679 373 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 BUD23O43709 281 aaKnown RBP11.88□□□□□ -0.51
DDB1-223ENST00000543658 MMP20O60882 483 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 RPP40O75818 363 aaKnown RBP11.88□□□□□ -0.51
DDB1-223ENST00000543658 IGLV3-19P01714 112 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 GSTA2P09210 222 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 C1SP09871 688 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 MYBL2P10244 700 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 C7P10643 843 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 AVPR2P30518 371 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 SPAM1P38567 509 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 ZNF140P52738 457 aaPredicted RBP11.88□□□□□ -0.51
DDB1-223ENST00000543658 STC1P52823 247 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 PMS2P54278 862 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 RALGDSQ12967 914 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 THOC5Q13769 683 aaKnown RBP11.88□□□□□ -0.51
DDB1-223ENST00000543658 FASTKD3Q14CZ7 662 aaKnown RBP11.88□□□□□ -0.51
DDB1-223ENST00000543658 PTPRRQ15256 657 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 ZNF284Q2VY69 593 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 AFTPHQ6ULP2 937 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 TRMT10CQ7L0Y3 403 aaKnown RBP11.88□□□□□ -0.51
DDB1-223ENST00000543658 TMC3Q7Z5M5 1100 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 HORMAD1Q86X24 394 aa11.88□□□□□ -0.51
DDB1-223ENST00000543658 RAVER1Q8IY67 606 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms