RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 MUC3BQ9H195 1237 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 NDFIP2Q9NV92 336 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 TBC1D13Q9NVG8 400 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 TBCCD1Q9NVR7 557 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 CMTM6Q9NX76 183 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 DSEQ9UL01 958 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 KCNH4Q9UQ05 1017 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 SMIM35A0A1B0GVV1 85 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 CLOCKO15516 846 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 SNAI1O95863 264 aaPredicted RBP12.94□□□□□ -0.34
DDX11-223ENST00000542838 HSD17B1P14061 328 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 HMOX2P30519 316 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 OXTRP30559 389 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 LHX1P48742 406 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 SLC5A3P53794 718 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 BNIP2Q12982 314 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 UGT3A2Q3SY77 523 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 GPR107Q5VW38 600 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 LCN8Q6JVE9 175 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 TMEM207Q6UWW9 146 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 LYSMD3Q7Z3D4 306 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 CPNE9Q8IYJ1 553 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 ANKRD13AQ8IZ07 590 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 MIER2Q8N344 545 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 MINDY1Q8N5J2 469 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 SLC45A3Q96JT2 553 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 PPP1R2P1Q96PQ5 205 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 ACTR3BQ9P1U1 418 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 MIA3Q5JRA6 1907 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 BPTFQ12830 3046 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 FAM163BP0C2L3 166 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 CDKN2DP55273 166 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 SH3BP2P78314 561 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 SLC14A2Q15849 920 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 ANKDD1AQ495B1 522 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 ISCA2Q86U28 154 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 OFCC1Q8IZS5 231 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 RYBPQ8N488 228 aaPredicted RBP12.94□□□□□ -0.34
DDX11-223ENST00000542838 OR6P1Q8NGX9 317 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 SEPT8Q92599 483 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 DCPSQ96C86 337 aaKnown RBP12.94□□□□□ -0.34
DDX11-223ENST00000542838 SMARCD1Q96GM5 515 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 PAIP1Q9H074 479 aaKnown RBP12.94□□□□□ -0.34
DDX11-223ENST00000542838 RPF2Q9H7B2 306 aaKnown RBP12.94□□□□□ -0.34
DDX11-223ENST00000542838 GID8Q9NWU2 228 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 ZNF711Q9Y462 761 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 DNAJC15Q9Y5T4 150 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 PTCH2Q9Y6C5 1203 aa12.94□□□□□ -0.34
DDX11-223ENST00000542838 ARPC2O15144 300 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 CHRM3P20309 590 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 CCT8P50990 548 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 YBX1P67809 324 aaKnown RBP12.93□□□□□ -0.34
DDX11-223ENST00000542838 GRB7Q14451 532 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 DUSP28Q4G0W2 176 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 TWF2Q6IBS0 349 aaKnown RBP12.93□□□□□ -0.34
DDX11-223ENST00000542838 TIGD7Q6NT04 549 aaPredicted RBP12.93□□□□□ -0.34
DDX11-223ENST00000542838 FASTKD5Q7L8L6 764 aaKnown RBP12.93□□□□□ -0.34
DDX11-223ENST00000542838 DDIASQ8IXT1 998 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 ADGRG5Q8IZF4 528 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 GIPC3Q8TF64 312 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 HDAC10Q969S8 669 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.93□□□□□ -0.34
DDX11-223ENST00000542838 MYRFLQ96LU7 910 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 TRIM8Q9BZR9 551 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 TSPYL2Q9H2G4 693 aaPredicted RBP12.93□□□□□ -0.34
DDX11-223ENST00000542838 CATSPERBQ9H7T0 1116 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 MID1IP1Q9NPA3 183 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 FADS3Q9Y5Q0 445 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 ZFC3H1O60293 1989 aaKnown RBP12.93□□□□□ -0.34
DDX11-223ENST00000542838 H3BMQ9 156 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 CCL22O00626 93 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 PPP6CO00743 305 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 EI24O14681 340 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 PIP5K1BO14986 540 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 SLC4A1P02730 911 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 SLC6A2P23975 617 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 TPP2P29144 1249 aaPredicted RBP12.93□□□□□ -0.34
DDX11-223ENST00000542838 CYP2C18P33260 490 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 HERVK_113P63132 956 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 RAB39AQ14964 217 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 RPS6KA2Q15349 733 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 CYP51A1Q16850 503 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 TMTC4Q5T4D3 741 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 ABRAXAS1Q6UWZ7 409 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 SPRED1Q7Z699 444 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 PIM3Q86V86 326 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 IFNEQ86WN2 208 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 CILP2Q8IUL8 1156 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 DHRSXQ8N5I4 330 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 OR52K2Q8NGK3 314 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 TWIST2Q8WVJ9 160 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 COG8Q96MW5 612 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 PPP1R10Q96QC0 940 aaKnown RBP12.93□□□□□ -0.34
DDX11-223ENST00000542838 ERVK-6Q9BXR3 956 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 POLR1BQ9H9Y6 1135 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 TBC1D23Q9NUY8 699 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 CDH7Q9ULB5 785 aa12.93□□□□□ -0.34
DDX11-223ENST00000542838 NYNRINQ9P2P1 1898 aaKnown RBP12.93□□□□□ -0.34
DDX11-223ENST00000542838 TRIM64A6NGJ6 449 aa12.92□□□□□ -0.34
DDX11-223ENST00000542838 FXYD1O00168 92 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms