RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 BCAT2O15382 392 aaPredicted RBP2.38□□□□□ -2.03
KNTC1-213ENST00000542727 APOHP02749 345 aaPredicted RBP2.38□□□□□ -2.03
KNTC1-213ENST00000542727 AFPP02771 609 aaKnown RBP2.38□□□□□ -2.03
KNTC1-213ENST00000542727 CFC1BP0CG36 223 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 CFC1P0CG37 223 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 CETPP11597 493 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 PCNAP12004 261 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 PTPN2P17706 415 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 CENPAP49450 140 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 HARS2P49590 506 aaKnown RBP2.38□□□□□ -2.03
KNTC1-213ENST00000542727 CTCFP49711 727 aaPredicted RBP2.38□□□□□ -2.03
KNTC1-213ENST00000542727 GNAQP50148 359 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 BLKP51451 505 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 ATP12AP54707 1039 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 NR1H2P55055 460 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 VAMP2P63027 116 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 NEXNQ0ZGT2 675 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 GRIK3Q13003 919 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 HSPB2Q16082 182 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 ALFQ53S48 1182 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 ESCO2Q56NI9 601 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 ACAD10Q6JQN1 1059 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 FBXO46Q6PJ61 603 aaPredicted RBP2.38□□□□□ -2.03
KNTC1-213ENST00000542727 MARK2Q7KZI7 788 aaKnown RBP2.38□□□□□ -2.03
KNTC1-213ENST00000542727 SHFQ7M4L6 423 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 NOXA1Q86UR1 476 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 SFR1Q86XK3 245 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 SFTPA2Q8IWL1 248 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 CCDC105Q8IYK2 499 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 C11orf65Q8NCR3 313 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 LNX1Q8TBB1 728 aaPredicted RBP2.38□□□□□ -2.03
KNTC1-213ENST00000542727 KCNG4Q8TDN1 519 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 LRRC8CQ8TDW0 803 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 TMEM170AQ8WVE7 144 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 ERGIC1Q969X5 290 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 TBATAQ96M53 351 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 SEC62Q99442 399 aaKnown RBP2.38□□□□□ -2.03
KNTC1-213ENST00000542727 MXRA8Q9BRK3 442 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 SLC26A6Q9BXS9 759 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 PREBQ9HCU5 417 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 ZNF334Q9HCZ1 680 aaPredicted RBP2.38□□□□□ -2.03
KNTC1-213ENST00000542727 CYSLTR2Q9NS75 346 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 C20orf141Q9NUB4 165 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 IRAK4Q9NWZ3 460 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 CISD1Q9NZ45 108 aaKnown RBP2.38□□□□□ -2.03
KNTC1-213ENST00000542727 OR6C3Q9NZP0 311 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 HCN3Q9P1Z3 774 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 SLC25A10Q9UBX3 287 aaPredicted RBP2.38□□□□□ -2.03
KNTC1-213ENST00000542727 HSPB7Q9UBY9 170 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 SIX4Q9UIU6 781 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 NAALADL1Q9UQQ1 740 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 LSM4Q9Y4Z0 139 aaKnown RBP2.38□□□□□ -2.03
KNTC1-213ENST00000542727 CYP46A1Q9Y6A2 500 aa2.38□□□□□ -2.03
KNTC1-213ENST00000542727 CCDC196A0A1B0GTZ2 297 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 A0A1B0GVY2 172 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 A0A1W2PS18 150 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 hDV102S1A0JD36 115 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 GAGE10A6NGK3 116 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 CBY3A6NI87 242 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 ZG16O60844 167 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 SEC31AO94979 1220 aaKnown RBP2.37□□□□□ -2.03
KNTC1-213ENST00000542727 ATP1A1P05023 1023 aaKnown RBP2.37□□□□□ -2.03
KNTC1-213ENST00000542727 ETFAP13804 333 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 KCNA5P22460 613 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 RYKP34925 604 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 ZNF132P52740 706 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 CASP6P55212 293 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 NLRP5P59047 1200 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 NEDD9Q14511 834 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 BAK1Q16611 211 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 C19orf48Q6RUI8 117 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 HAPLN4Q86UW8 402 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 MYPOPQ86VE0 399 aaPredicted RBP2.37□□□□□ -2.03
KNTC1-213ENST00000542727 IL17RCQ8NAC3 791 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 DBF4BQ8NFT6 615 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 KLHL29Q96CT2 875 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 PABPC5Q96DU9 382 aaKnown RBP2.37□□□□□ -2.03
KNTC1-213ENST00000542727 RBM4Q9BWF3 364 aaKnown RBP2.37□□□□□ -2.03
KNTC1-213ENST00000542727 EGLN1Q9GZT9 426 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 USP44Q9H0E7 712 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 PDCL3Q9H2J4 239 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 BPIFA1Q9NP55 256 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 UBN1Q9NPG3 1134 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 SMYD2Q9NRG4 433 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 KCND2Q9NZV8 630 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 PDP2Q9P2J9 529 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 SLCO3A1Q9UIG8 710 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 RCOR1Q9UKL0 485 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 CARD8Q9Y2G2 431 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.37□□□□□ -2.03
KNTC1-213ENST00000542727 SNX9Q9Y5X1 595 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 A3GALT2U3KPV4 340 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 RUSC2Q8N2Y8 1516 aa2.37□□□□□ -2.03
KNTC1-213ENST00000542727 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.36□□□□□ -2.03
KNTC1-213ENST00000542727 A0A1W2PPH5 198 aa2.36□□□□□ -2.03
KNTC1-213ENST00000542727 LRRC53A6NM62 1247 aa2.36□□□□□ -2.03
KNTC1-213ENST00000542727 EBAG9O00559 213 aa2.36□□□□□ -2.03
KNTC1-213ENST00000542727 HSPA12AO43301 675 aa2.36□□□□□ -2.03
KNTC1-213ENST00000542727 ZIC3O60481 467 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms