RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 BLMP54132 1417 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-217ENST00000541578 NCOA2Q15596 1464 aa4.37□□□□□ -1.71
SNHG1-217ENST00000541578 EFCAB6Q5THR3 1501 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 LRP5O75197 1615 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 A0A1W2PQM1 296 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 A0A1W2PRG0 241 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 INPPL1O15357 1258 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 LIASO43766 372 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 PAGE4O60829 102 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 GGPS1O95749 300 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 ADRB2P07550 413 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 RFPL3SP0C7P2 107 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 SP100P23497 879 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-217ENST00000541578 YWHAQP27348 245 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 LIG4P49917 911 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 STAT2P52630 851 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 ARSFP54793 590 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 MFAP4P55083 255 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 CEBPZQ03701 1054 aaKnown RBP4.36□□□□□ -1.71
SNHG1-217ENST00000541578 MTA1Q13330 715 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 NAB2Q15742 525 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 FBXO43Q4G163 708 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 CCDC184Q52MB2 194 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 TCP11X2Q5H9J9 407 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 HECTD3Q5T447 861 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 RPUSD3Q6P087 351 aaKnown RBP4.36□□□□□ -1.71
SNHG1-217ENST00000541578 FAM47EQ6ZV65 393 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 CYB5R4Q7L1T6 521 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 GALNTL5Q7Z4T8 443 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 MDGA2Q7Z553 956 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 IGFN1Q86VF2 1251 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 ANKRD13BQ86YJ7 626 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 RHPN2Q8IUC4 686 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 LURAP1LQ8IV03 231 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 KIAA2013Q8IYS2 634 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 C9orf106Q8NAJ2 232 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 POGLUT1Q8NBL1 392 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 NSMCE1Q8WV22 266 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 PRPF31Q8WWY3 499 aaKnown RBP4.36□□□□□ -1.71
SNHG1-217ENST00000541578 ZKSCAN4Q969J2 545 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-217ENST00000541578 ZC3HAV1LQ96H79 300 aaKnown RBP4.36□□□□□ -1.71
SNHG1-217ENST00000541578 PKNOX2Q96KN3 472 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 GBP5Q96PP8 586 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 SIN3AQ96ST3 1273 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 TM2D2Q9BX73 214 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 STRA6Q9BX79 667 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 IFIH1Q9BYX4 1025 aaKnown RBP4.36□□□□□ -1.71
SNHG1-217ENST00000541578 KLHL4Q9C0H6 718 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 POLR1BQ9H9Y6 1135 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 SLC6A13Q9NSD5 602 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 ARGLU1Q9NWB6 273 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-217ENST00000541578 NCKIPSDQ9NZQ3 722 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 HDAC6Q9UBN7 1215 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 RASAL2Q9UJF2 1139 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 ANAPC5Q9UJX4 755 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 CARD8Q9Y2G2 431 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 ADAM18Q9Y3Q7 739 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 SPATA31A5Q5VU36 1347 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 SPATA31A7Q8IWB4 1347 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 DCCP43146 1447 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 CAMSAP2Q08AD1 1489 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 RPRD2Q5VT52 1461 aaKnown RBP4.36□□□□□ -1.71
SNHG1-217ENST00000541578 MAP3K1Q13233 1512 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 ARHGEF5Q12774 1597 aa4.36□□□□□ -1.71
SNHG1-217ENST00000541578 PIK3C2BO00750 1634 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 LRP6O75581 1613 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 CEP152O94986 1710 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 hCG_1809904A0A1W2PP81 198 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 A0A1W2PPE2 198 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 A0A1W2PR64 198 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 DPPA5A6NC42 116 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 MYMKA6NI61 221 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 BTBD18B2RXH4 712 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 PSMA7O14818 248 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 GPC4O75487 556 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 PLAUP00749 431 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 ABCB1P08183 1280 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-217ENST00000541578 CYP19A1P11511 503 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-217ENST00000541578 ITGB6P18564 788 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 KLRC2P26717 231 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 MSH2P43246 934 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 ZNF84P51523 738 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 GALCP54803 685 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 F2RL1P55085 397 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 TFAP4Q01664 338 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 COG2Q14746 738 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 TWIST1Q15672 202 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 ZNF260Q3ZCT1 412 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 EARS2Q5JPH6 523 aaKnown RBP4.35□□□□□ -1.71
SNHG1-217ENST00000541578 GARNL3Q5VVW2 1013 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 KRT80Q6KB66 452 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 LRIG3Q6UXM1 1119 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 CCDC25Q86WR0 208 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 TDRPQ86YL5 185 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 ZCCHC9Q8N567 271 aaKnown RBP4.35□□□□□ -1.71
SNHG1-217ENST00000541578 SYT2Q8N9I0 419 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-217ENST00000541578 BCAS4Q8TDM0 211 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 FAR1Q8WVX9 515 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 PSPC1Q8WXF1 523 aaKnown RBP4.35□□□□□ -1.71
SNHG1-217ENST00000541578 SGCDQ92629 289 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms