RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 SCAF11Q99590 1463 aaKnown RBP4.01□□□□□ -1.77
KNTC1-211ENST00000541427 LINC01553A4QN01 128 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 NPIPB11E5RHQ5 1161 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 TSPAN4O14817 238 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 T-ENOLP0DO92 83 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 PCNAP12004 261 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 ATP1A3P13637 1013 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 C21orf33P30042 268 aaPredicted RBP4.01□□□□□ -1.77
KNTC1-211ENST00000541427 PIGAP37287 484 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 KCNJ4P48050 445 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 COMPP49747 757 aaPredicted RBP4.01□□□□□ -1.77
KNTC1-211ENST00000541427 DSC1Q08554 894 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 VEPH1Q14D04 833 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 ARHGEF6Q15052 776 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 RNPS1Q15287 305 aaKnown RBP4.01□□□□□ -1.77
KNTC1-211ENST00000541427 ZNF585BQ52M93 769 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 ALFQ53S48 1182 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 HSP90AB4PQ58FF6 505 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 INTS11Q5TA45 600 aaKnown RBP4.01□□□□□ -1.77
KNTC1-211ENST00000541427 ACAD10Q6JQN1 1059 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 MMS22LQ6ZRQ5 1243 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 FJX1Q86VR8 437 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 TDRPQ86YL5 185 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 TCP11L2Q8N4U5 519 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 NFKBIDQ8NI38 313 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 ZUFSPQ96AP4 578 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 KLHL29Q96CT2 875 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 KIF1BPQ96EK5 621 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 SLC25A33Q9BSK2 321 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 SEZ6LQ9BYH1 1024 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 USP44Q9H0E7 712 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 VEZTQ9HBM0 779 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 KCND2Q9NZV8 630 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 MPP6Q9NZW5 540 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 NFE2L3Q9Y4A8 694 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 TMEM131LA2VDJ0 1609 aa4.01□□□□□ -1.77
KNTC1-211ENST00000541427 ERVK-7P63135 1459 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 IGLV5-52A0A0A0MRZ9 124 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 SRRM3A6NNA2 597 aaPredicted RBP4□□□□□ -1.77
KNTC1-211ENST00000541427 TAF4O00268 1085 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 VNN2O95498 520 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 AGAP20933 346 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 RPL3P39023 403 aaKnown RBP4□□□□□ -1.77
KNTC1-211ENST00000541427 PAFAH1B1P43034 410 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 HDAC4P56524 1084 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 SGO1Q5FBB7 561 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 HIST2H2BCQ6DN03 193 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 HIST2H2BDQ6DRA6 164 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 TYW3Q6IPR3 259 aaKnown RBP4□□□□□ -1.77
KNTC1-211ENST00000541427 PDXDC1Q6P996 788 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 RRM2BQ7LG56 351 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 RBM23Q86U06 439 aaKnown RBP4□□□□□ -1.77
KNTC1-211ENST00000541427 SLC35F3Q8IY50 421 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 TSPYL6Q8N831 410 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 NOC3LQ8WTT2 800 aaKnown RBP4□□□□□ -1.77
KNTC1-211ENST00000541427 FAM216AQ8WUB2 273 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 MED30Q96HR3 178 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 NR1H4Q96RI1 486 aaPredicted RBP4□□□□□ -1.77
KNTC1-211ENST00000541427 BBS4Q96RK4 519 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 SEC62Q99442 399 aaKnown RBP4□□□□□ -1.77
KNTC1-211ENST00000541427 TKTL2Q9H0I9 626 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 SMYD2Q9NRG4 433 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 CISD1Q9NZ45 108 aaKnown RBP4□□□□□ -1.77
KNTC1-211ENST00000541427 CAMK2AQ9UQM7 478 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 ASXL1Q8IXJ9 1541 aa4□□□□□ -1.77
KNTC1-211ENST00000541427 RPGRIP1LQ68CZ1 1315 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 KDM3AQ9Y4C1 1321 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 TSPOAP1O95153 1857 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 SETD1AO15047 1707 aaKnown RBP3.99□□□□□ -1.77
KNTC1-211ENST00000541427 C4orf47A7E2U8 309 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 BCAT2O15382 392 aaPredicted RBP3.99□□□□□ -1.77
KNTC1-211ENST00000541427 KCNJ13O60928 360 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 SERPINI2O75830 405 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 SEC31AO94979 1220 aaKnown RBP3.99□□□□□ -1.77
KNTC1-211ENST00000541427 TFP02787 698 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 PRSS2P07478 247 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 ETFAP13804 333 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 EPHA8P29322 1005 aaPredicted RBP3.99□□□□□ -1.77
KNTC1-211ENST00000541427 ABCD1P33897 745 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 DSCR9P59020 149 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 DDX10Q13206 875 aaKnown RBP3.99□□□□□ -1.77
KNTC1-211ENST00000541427 PLCB4Q15147 1175 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 PPP2R5BQ15173 497 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 EFNB3Q15768 340 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 FAM69BQ5VUD6 431 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 ANKRD54Q6NXT1 300 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 INO80CQ6PI98 192 aaPredicted RBP3.99□□□□□ -1.77
KNTC1-211ENST00000541427 FBXO46Q6PJ61 603 aaPredicted RBP3.99□□□□□ -1.77
KNTC1-211ENST00000541427 SHFQ7M4L6 423 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 CERS3Q8IU89 383 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 ARMC8Q8IUR7 673 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 NAXEQ8NCW5 288 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 TMED6Q8WW62 240 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 PABPC5Q96DU9 382 aaKnown RBP3.99□□□□□ -1.77
KNTC1-211ENST00000541427 TESK2Q96S53 571 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 PLEKHA4Q9H4M7 779 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 MAGEE1Q9HCI5 957 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 PREBQ9HCU5 417 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 OCIAD1Q9NX40 245 aa3.99□□□□□ -1.77
KNTC1-211ENST00000541427 A4GNTQ9UNA3 340 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms