RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 ADAMTS14Q8WXS8 1223 aa13.12□□□□□ -0.31
LTBR-208ENST00000541005 NUS1Q96E22 293 aa13.12□□□□□ -0.31
LTBR-208ENST00000541005 AGAP3Q96P47 875 aa13.12□□□□□ -0.31
LTBR-208ENST00000541005 APOOQ9BUR5 198 aa13.12□□□□□ -0.31
LTBR-208ENST00000541005 HEMGNQ9BXL5 484 aa13.12□□□□□ -0.31
LTBR-208ENST00000541005 ADGRE3Q9BY15 652 aa13.12□□□□□ -0.31
LTBR-208ENST00000541005 CEP41Q9BYV8 373 aa13.12□□□□□ -0.31
LTBR-208ENST00000541005 GLOD4Q9HC38 313 aa13.12□□□□□ -0.31
LTBR-208ENST00000541005 UCKL1Q9NWZ5 548 aa13.12□□□□□ -0.31
LTBR-208ENST00000541005 SEPT10Q9P0V9 454 aa13.12□□□□□ -0.31
LTBR-208ENST00000541005 KLF15Q9UIH9 416 aa13.12□□□□□ -0.31
LTBR-208ENST00000541005 ANGPTL2Q9UKU9 493 aa13.12□□□□□ -0.31
LTBR-208ENST00000541005 CSNK1G3Q9Y6M4 447 aa13.12□□□□□ -0.31
LTBR-208ENST00000541005 COL27A1Q8IZC6 1860 aaPredicted RBP13.12□□□□□ -0.31
LTBR-208ENST00000541005 UNC13CQ8NB66 2214 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 A8MX80 341 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 ANKRD66B4E2M5 251 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 SCAMP1O15126 338 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 ZNF189O75820 626 aaPredicted RBP13.11□□□□□ -0.31
LTBR-208ENST00000541005 TJP3O95049 919 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 FTCDO95954 541 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 PCCBP05166 539 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 CCDC175P0C221 793 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 ATXN1LP0C7T5 689 aaKnown RBP13.11□□□□□ -0.31
LTBR-208ENST00000541005 JUNDP17535 347 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 CTPS1P17812 591 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 CD68P34810 354 aaPredicted RBP13.11□□□□□ -0.31
LTBR-208ENST00000541005 STC1P52823 247 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 EPHB1P54762 984 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 CDKN3Q16667 212 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 QPCTQ16769 361 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 PROX2Q3B8N5 592 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 PNCKQ6P2M8 343 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 CRTC1Q6UUV9 634 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 B4GALNT4Q76KP1 1039 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 ZNF765Q7L2R6 523 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 TECPR1Q7Z6L1 1165 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 SLCO6A1Q86UG4 719 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 ZC3H18Q86VM9 953 aaKnown RBP13.11□□□□□ -0.31
LTBR-208ENST00000541005 PHACTR4Q8IZ21 702 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 PLA2G15Q8NCC3 412 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 LPCAT1Q8NF37 534 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 ATL2Q8NHH9 583 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 BTN2A2Q8WVV5 523 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 HTR3CQ8WXA8 447 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 HAUS1Q96CS2 278 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 RBM15Q96T37 977 aaKnown RBP eCLIP13.11□□□□□ -0.31
LTBR-208ENST00000541005 NLGN3Q9NZ94 848 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 PNMA8BQ9ULN7 279 aaPredicted RBP13.11□□□□□ -0.31
LTBR-208ENST00000541005 OR1A2Q9Y585 309 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 PCDHGA1Q9Y5H4 931 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 ACACAQ13085 2346 aa13.11□□□□□ -0.31
LTBR-208ENST00000541005 FAM221BA6H8Z2 402 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 NEMP2A6NFY4 417 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 K7ESM1 405 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 CACNB4O00305 520 aaPredicted RBP13.1□□□□□ -0.31
LTBR-208ENST00000541005 TRIM38O00635 465 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 ENC1O14682 589 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 C1SP09871 688 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 MYCLP1P12525 358 aaPredicted RBP13.1□□□□□ -0.31
LTBR-208ENST00000541005 TSHRP16473 764 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 HTR1BP28222 390 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 ETV3P41162 512 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 ACADVLP49748 655 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 BLKP51451 505 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 OTUD4Q01804 1114 aaKnown RBP13.1□□□□□ -0.31
LTBR-208ENST00000541005 PPARDQ03181 441 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 PTSQ03393 145 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 FOXC1Q12948 553 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 KLF1Q13351 362 aaPredicted RBP13.1□□□□□ -0.31
LTBR-208ENST00000541005 PTPRRQ15256 657 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 ALG11Q2TAA5 492 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 ZNF542PQ5EBM4 170 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 CCDC181Q5TID7 509 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 AADACL2Q6P093 401 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 Q6ZVL8 140 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 NLRP8Q86W28 1048 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 CDKL3Q8IVW4 592 aaPredicted RBP13.1□□□□□ -0.31
LTBR-208ENST00000541005 NRSN1Q8IZ57 195 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 ZNF567Q8N184 647 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 PELI3Q8N2H9 469 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 FAM181AQ8N9Y4 354 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 FUBP1Q96AE4 644 aaKnown RBP13.1□□□□□ -0.31
LTBR-208ENST00000541005 CNDP2Q96KP4 475 aaKnown RBP13.1□□□□□ -0.31
LTBR-208ENST00000541005 WDR92Q96MX6 357 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 SMIM14Q96QK8 99 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 FCRL5Q96RD9 977 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 LRRC61Q9BV99 259 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 DUSP23Q9BVJ7 150 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 TEX101Q9BY14 249 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 WDR26Q9H7D7 661 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 CAAP1Q9H8G2 361 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 SPASTQ9UBP0 616 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 APOBEC3BQ9UH17 382 aaKnown RBP13.1□□□□□ -0.31
LTBR-208ENST00000541005 TRHDEQ9UKU6 1024 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 GUCA1BQ9UMX6 200 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 PACSIN2Q9UNF0 486 aaPredicted RBP13.1□□□□□ -0.31
LTBR-208ENST00000541005 DGKBQ9Y6T7 804 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 EPG5Q9HCE0 2579 aa13.1□□□□□ -0.31
LTBR-208ENST00000541005 GOLGA6L3A6NEY3 463 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms