RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 UTP6Q9NYH9 597 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 IKZF3Q9UKT9 509 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 CORINQ9Y5Q5 1042 aa10.38□□□□□ -0.75
CDC42SE1-207ENST00000540998 BRCA1P38398 1863 aaKnown RBP10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 ERI2A8K979 691 aaKnown RBP10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 ARPC2O15144 300 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 TSPAN3O60637 253 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 SCNN1AP37088 669 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 MLLT10P55197 1068 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 CREB5Q02930 508 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 MERTKQ12866 999 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 OR4D1Q15615 310 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 SV2CQ496J9 727 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 SAMD4BQ5PRF9 694 aaKnown RBP10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 BORAQ6PGQ7 559 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 RALGPS2Q86X27 583 aaPredicted RBP10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 TMEM126BQ8IUX1 230 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 PTGR2Q8N8N7 351 aaPredicted RBP10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 OR13J1Q8NGT2 312 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 TUBGCP3Q96CW5 907 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 CDCA5Q96FF9 252 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 PLEKHG4BQ96PX9 1271 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 OSBPL6Q9BZF3 934 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 SEMA4BQ9NPR2 832 aaPredicted RBP10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 TREX1Q9NSU2 369 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 EXD2Q9NVH0 621 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 ZSWIM8A7E2V4 1837 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 NYNRINQ9P2P1 1898 aaKnown RBP10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 MIA3Q5JRA6 1907 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 OTOFQ9HC10 1997 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 DOCK3Q8IZD9 2030 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 CLOCKO15516 846 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 PAGE1O75459 146 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 CDK14O94921 469 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 LTA4HP09960 611 aaKnown RBP10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 GJA5P36382 358 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 BEX3Q00994 111 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 KYAT1Q16773 422 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 ARL13BQ3SXY8 428 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 PPP4R4Q6NUP7 873 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 BTLAQ7Z6A9 289 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 ISCA2Q86U28 154 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 ZC3H7AQ8IWR0 971 aaKnown RBP10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 KLHL23Q8NBE8 558 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 NLGN2Q8NFZ4 835 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 VPS50Q96JG6 964 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 CYP2S1Q96SQ9 504 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 ACOX2Q99424 681 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 SLC25A23Q9BV35 468 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 UPF3AQ9H1J1 476 aaKnown RBP10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 RPF2Q9H7B2 306 aaKnown RBP10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 SLC38A7Q9NVC3 462 aa10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 IPO11Q9UI26 975 aaKnown RBP10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 NUP214P35658 2090 aaPredicted RBP10.37□□□□□ -0.75
CDC42SE1-207ENST00000540998 BTBD19C9JJ37 291 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 HHLA1C9JL84 531 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 CD4P01730 458 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 CTSHP09668 335 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 OR4Q2P0C623 313 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 HGFP14210 728 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 MATN1P21941 496 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 SLC6A2P23975 617 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 BRCC3P46736 316 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 SEMA3AQ14563 771 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 PTPRRQ15256 657 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 PAGE3Q5JUK9 113 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 KCTD8Q6ZWB6 473 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 ZNF554Q86TJ5 538 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 CNTN4Q8IWV2 1026 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 BPIFB6Q8NFQ5 453 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 MYLPFQ96A32 169 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 NTAN1Q96AB6 310 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 THAP11Q96EK4 314 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 MTG1Q9BT17 334 aaPredicted RBP10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 INTS7Q9NVH2 962 aaKnown RBP10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 ENPP3O14638 875 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 SLC22A2O15244 555 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 HAPLN1P10915 354 aaPredicted RBP10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 UGT1A1P22309 533 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 UGT1A4P22310 534 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 EEF1B2P24534 225 aaKnown RBP10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 ADRA1AP35348 466 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 UGT1A3P35503 534 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 UGT1A5P35504 534 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 AGTR2P50052 363 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 STX1BP61266 288 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 SLC10A7Q0GE19 358 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 SCAPQ12770 1279 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 TRAF2Q12933 501 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 UGP2Q16851 508 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 ZNF678Q5SXM1 525 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 PATL1Q86TB9 770 aaKnown RBP10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 ADGRG5Q8IZF4 528 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 HS3ST5Q8IZT8 346 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 LRRC43Q8N309 656 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 GPR152Q8TDT2 470 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 TWIST2Q8WVJ9 160 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 CASP10Q92851 521 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 FCRL2Q96LA5 508 aaPredicted RBP10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 TBATAQ96M53 351 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms