RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 CEPT1Q9Y6K0 416 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 LRRC53A6NM62 1247 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 PRAC2D3DTV9 90 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 KRT36O76013 467 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 DDNO94850 711 aaPredicted RBP6.02□□□□□ -1.45
YBX3-210ENST00000540975 HOXB5P09067 269 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 DDX5P17844 614 aaKnown RBP6.02□□□□□ -1.45
YBX3-210ENST00000540975 MAOAP21397 527 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 NAE1Q13564 534 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 TNFAIP1Q13829 316 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 KRT24Q2M2I5 525 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 SLC45A4Q5BKX6 768 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 METTL2BQ6P1Q9 378 aaKnown RBP6.02□□□□□ -1.45
YBX3-210ENST00000540975 FAM122CQ6P4D5 195 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 UNQ6126/PRO20091Q6UXV3 157 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 Q6ZTC4 211 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 TUBA1AQ71U36 451 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 DSELQ8IZU8 1212 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 POC1AQ8NBT0 407 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 IL17REQ8NFR9 667 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 SPATA20Q8TB22 786 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 ZUFSPQ96AP4 578 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 METTL2AQ96IZ6 378 aaKnown RBP6.02□□□□□ -1.45
YBX3-210ENST00000540975 NR1H4Q96RI1 486 aaPredicted RBP6.02□□□□□ -1.45
YBX3-210ENST00000540975 TUBA1CQ9BQE3 449 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 USP44Q9H0E7 712 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 PCDH9Q9HC56 1237 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 PREBQ9HCU5 417 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 HINT3Q9NQE9 182 aaKnown RBP6.02□□□□□ -1.45
YBX3-210ENST00000540975 PCDHB16Q9NRJ7 776 aa6.02□□□□□ -1.45
YBX3-210ENST00000540975 ARID4BQ4LE39 1312 aaPredicted RBP6.01□□□□□ -1.45
YBX3-210ENST00000540975 KDM3AQ9Y4C1 1321 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 IGHV4OR15-8A0A075B7B6 117 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 PLEKHD1A6NEE1 506 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 TTC36A6NLP5 189 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 ZNF587BE7ETH6 402 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 TIPRLO75663 272 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 RFPL2O75678 378 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 AGR2O95994 175 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 F7P08709 466 aaPredicted RBP6.01□□□□□ -1.45
YBX3-210ENST00000540975 EPHA8P29322 1005 aaPredicted RBP6.01□□□□□ -1.45
YBX3-210ENST00000540975 CDAP32320 146 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 CTCFP49711 727 aaPredicted RBP6.01□□□□□ -1.45
YBX3-210ENST00000540975 DLX5P56178 289 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 FGFBP1Q14512 234 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 C9orf50Q5SZB4 431 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 SLC36A4Q6YBV0 504 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 KRBA2Q6ZNG9 492 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 ZNF441Q8N8Z8 693 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 NEK9Q8TD19 979 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 MAGEC3Q8TD91 643 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 SH3GL2Q99962 352 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 PRKRIP1Q9H875 184 aaPredicted RBP6.01□□□□□ -1.45
YBX3-210ENST00000540975 UBTD1Q9HAC8 227 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 UBN1Q9NPG3 1134 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 C1RLQ9NZP8 487 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 HAO1Q9UJM8 370 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 ERVK-11Q9UQG0 969 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 CAMK2AQ9UQM7 478 aa6.01□□□□□ -1.45
YBX3-210ENST00000540975 A0A0G2JPF8 293 aa6□□□□□ -1.45
YBX3-210ENST00000540975 HNRNPCL3B7ZW38 293 aa6□□□□□ -1.45
YBX3-210ENST00000540975 SNAP23O00161 211 aa6□□□□□ -1.45
YBX3-210ENST00000540975 NPHP1O15259 732 aa6□□□□□ -1.45
YBX3-210ENST00000540975 BUB3O43684 328 aa6□□□□□ -1.45
YBX3-210ENST00000540975 HNRNPCL1O60812 293 aaKnown RBP6□□□□□ -1.45
YBX3-210ENST00000540975 ZNF432O94892 652 aa6□□□□□ -1.45
YBX3-210ENST00000540975 HNRNPCL4P0DMR1 293 aa6□□□□□ -1.45
YBX3-210ENST00000540975 UBL4AP11441 157 aa6□□□□□ -1.45
YBX3-210ENST00000540975 EIF3BP55884 814 aaKnown RBP6□□□□□ -1.45
YBX3-210ENST00000540975 ZRSR1Q15695 479 aaKnown RBP6□□□□□ -1.45
YBX3-210ENST00000540975 COL28A1Q2UY09 1125 aa6□□□□□ -1.45
YBX3-210ENST00000540975 QSOX2Q6ZRP7 698 aa6□□□□□ -1.45
YBX3-210ENST00000540975 ZNF771Q7L3S4 317 aaPredicted RBP6□□□□□ -1.45
YBX3-210ENST00000540975 NAGSQ8N159 534 aa6□□□□□ -1.45
YBX3-210ENST00000540975 FIG4Q92562 907 aa6□□□□□ -1.45
YBX3-210ENST00000540975 SPRY4Q9C004 299 aa6□□□□□ -1.45
YBX3-210ENST00000540975 PPP1R3EQ9H7J1 279 aa6□□□□□ -1.45
YBX3-210ENST00000540975 MMP25Q9NPA2 562 aa6□□□□□ -1.45
YBX3-210ENST00000540975 DONSONQ9NYP3 566 aa6□□□□□ -1.45
YBX3-210ENST00000540975 INTS6Q9UL03 887 aaKnown RBP6□□□□□ -1.45
YBX3-210ENST00000540975 KCNS2Q9ULS6 477 aa6□□□□□ -1.45
YBX3-210ENST00000540975 TTC7AQ9ULT0 858 aaPredicted RBP6□□□□□ -1.45
YBX3-210ENST00000540975 CGNL1Q0VF96 1302 aa5.99□□□□□ -1.45
YBX3-210ENST00000540975 SEC61BP60468 96 aaKnown RBP5.99□□□□□ -1.45
YBX3-210ENST00000540975 ZBTB17Q13105 803 aa5.99□□□□□ -1.45
YBX3-210ENST00000540975 DRAP1Q14919 205 aaPredicted RBP5.99□□□□□ -1.45
YBX3-210ENST00000540975 CTF1Q16619 201 aa5.99□□□□□ -1.45
YBX3-210ENST00000540975 ALG11Q2TAA5 492 aa5.99□□□□□ -1.45
YBX3-210ENST00000540975 GGNBP1Q5YKI7 109 aa5.99□□□□□ -1.45
YBX3-210ENST00000540975 CCNI2Q6ZMN8 369 aaPredicted RBP5.99□□□□□ -1.45
YBX3-210ENST00000540975 TMEM19Q96HH6 336 aa5.99□□□□□ -1.45
YBX3-210ENST00000540975 EVA1AQ9H8M9 152 aa5.99□□□□□ -1.45
YBX3-210ENST00000540975 JMJD4Q9H9V9 463 aa5.99□□□□□ -1.45
YBX3-210ENST00000540975 EBF2Q9HAK2 575 aa5.99□□□□□ -1.45
YBX3-210ENST00000540975 ASAH2Q9NR71 780 aa5.99□□□□□ -1.45
YBX3-210ENST00000540975 SLC6A13Q9NSD5 602 aa5.99□□□□□ -1.45
YBX3-210ENST00000540975 MCM9Q9NXL9 1143 aa5.99□□□□□ -1.45
YBX3-210ENST00000540975 VDAC3Q9Y277 283 aa5.99□□□□□ -1.45
YBX3-210ENST00000540975 AAR2Q9Y312 384 aaKnown RBP5.99□□□□□ -1.45
YBX3-210ENST00000540975 PDS5AQ29RF7 1337 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms