RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 VAT1Q99536 393 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 FERMT1Q9BQL6 677 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 APOOQ9BUR5 198 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 MLPHQ9BV36 600 aaPredicted RBP9.24□□□□□ -0.93
SNHG1-215ENST00000540904 UCKL1Q9NWZ5 548 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 GOLGA6AQ9NYA3 693 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 RPL26L1Q9UNX3 145 aaKnown RBP9.24□□□□□ -0.93
SNHG1-215ENST00000540904 CACNA1EQ15878 2313 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 TRPM6Q9BX84 2022 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 C1orf232A0A0U1RR37 186 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 TCRBV7S2A1N4TA0A589 114 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 ANKRD66B4E2M5 251 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 H3BM21 787 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 K7ESM1 405 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 PSMD11O00231 422 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 TOR1BO14657 336 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 FFAR2O15552 330 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 PIAS2O75928 621 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 STK10O94804 968 aaKnown RBP9.23□□□□□ -0.93
SNHG1-215ENST00000540904 CLDN7O95471 211 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 CSF2P04141 144 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 PIRTP0C851 137 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 ZNF30P17039 623 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 JUNDP17535 347 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 DGKAP23743 735 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 HTR1BP28222 390 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 TNNT3P45378 269 aaPredicted RBP9.23□□□□□ -0.93
SNHG1-215ENST00000540904 HNRNPKP61978 463 aaKnown RBP eCLIP9.23□□□□□ -0.93
SNHG1-215ENST00000540904 PTSQ03393 145 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 CDK18Q07002 472 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 EIF2B5Q13144 721 aaKnown RBP9.23□□□□□ -0.93
SNHG1-215ENST00000540904 KLF1Q13351 362 aaPredicted RBP9.23□□□□□ -0.93
SNHG1-215ENST00000540904 MTM1Q13496 603 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 QPCTQ16769 361 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 SEL1L2Q5TEA6 688 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 MEI1Q5TIA1 1274 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 CCDC70Q6NSX1 233 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 PNCKQ6P2M8 343 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 ENPP7Q6UWV6 458 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 MACC1Q6ZN28 852 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 RFLNAQ6ZTI6 216 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 PELI3Q8N2H9 469 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 TTC13Q8NBP0 860 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 TRIM58Q8NG06 486 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 TADA1Q96BN2 335 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 DTD2Q96FN9 168 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 TRIB3Q96RU7 358 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 CDC6Q99741 560 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 FTSJ1Q9UET6 329 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 FAM153AQ9UHL3 310 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 RSPH14Q9UHP6 348 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 CD84Q9UIB8 345 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 KLF15Q9UIH9 416 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 TRHDEQ9UKU6 1024 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 DNPEPQ9ULA0 475 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 R3HDM2Q9Y2K5 976 aaKnown RBP9.23□□□□□ -0.93
SNHG1-215ENST00000540904 SPTBN4Q9H254 2564 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 SHROOM3Q8TF72 1996 aa9.23□□□□□ -0.93
SNHG1-215ENST00000540904 CACNB4O00305 520 aaPredicted RBP9.22□□□□□ -0.93
SNHG1-215ENST00000540904 NDST3O95803 873 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 SLC4A1P02730 911 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 ADRB1P08588 477 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 C1SP09871 688 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 NME1P15531 152 aaKnown RBP9.22□□□□□ -0.93
SNHG1-215ENST00000540904 STC1P52823 247 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 WNT3AP56704 352 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 PPARDQ03181 441 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 NFATC4Q14934 902 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 SLC14A2Q15849 920 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 CCDC157Q569K6 752 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 ANKRD20A2Q5SQ80 823 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 FAXCQ5TGI0 409 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 ANKRD20A1Q5TYW2 823 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 ANKRD20A3Q5VUR7 823 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 RAET1GQ6H3X3 334 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 ESRP1Q6NXG1 681 aaKnown RBP9.22□□□□□ -0.93
SNHG1-215ENST00000540904 KANSL1Q7Z3B3 1105 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 LYSMD3Q7Z3D4 306 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 RD3Q7Z3Z2 195 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 TECPR1Q7Z6L1 1165 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 RBFAQ8N0V3 343 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 CBARPQ8N350 705 aaPredicted RBP9.22□□□□□ -0.93
SNHG1-215ENST00000540904 SLC25A45Q8N413 288 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 FAM71DQ8N9W8 422 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 IPMKQ8NFU5 416 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 BAHD1Q8TBE0 780 aaPredicted RBP9.22□□□□□ -0.93
SNHG1-215ENST00000540904 CCDC110Q8TBZ0 833 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 CCHCR1Q8TD31 782 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 UBE2Q2Q8WVN8 375 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 TSACCQ96A04 125 aaPredicted RBP9.22□□□□□ -0.93
SNHG1-215ENST00000540904 MARVELD3Q96A59 401 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 FUBP1Q96AE4 644 aaKnown RBP9.22□□□□□ -0.93
SNHG1-215ENST00000540904 OXNAD1Q96HP4 312 aaPredicted RBP9.22□□□□□ -0.93
SNHG1-215ENST00000540904 FCRL5Q96RD9 977 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 LYSMD1Q96S90 227 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 LGR4Q9BXB1 951 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 FSD1LQ9BXM9 530 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 SLC13A1Q9BZW2 595 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 GBA3Q9H227 469 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 TCEAL2Q9H3H9 227 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms