RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 MAFFQ9ULX9 164 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 ASB3Q9Y575 518 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 CSADQ9Y600 493 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 CHST10O43529 356 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 PSMC5P62195 406 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 FXNQ16595 210 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 EML3Q32P44 896 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 TTLL9Q3SXZ7 439 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 ANGEL2Q5VTE6 544 aaKnown RBP8.77□□□□□ -1.01
YBX3-208ENST00000540447 ZNF470Q6ECI4 717 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 ZNF773Q6PK81 442 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 LHFPL3Q86UP9 236 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 FAM156AQ8NDB6 213 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 UBA3Q8TBC4 463 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 RDH11Q8TC12 318 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 IRGQQ8WZA9 623 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 ACTR8Q9H981 624 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 SNX6Q9UNH7 406 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 DUOX2Q9NRD8 1548 aa8.77□□□□□ -1.01
YBX3-208ENST00000540447 PNPLA7Q6ZV29 1317 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 A0A0J9YYE9 177 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 GSG1L2A8MUP6 293 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 MED24O75448 989 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 ERVK-10P10266 1014 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 CKMT2P17540 419 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 ATP5F1P24539 256 aaPredicted RBP8.76□□□□□ -1.01
YBX3-208ENST00000540447 PIK3CBP42338 1070 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 YWHAZP63104 245 aaKnown RBP8.76□□□□□ -1.01
YBX3-208ENST00000540447 CUL2Q13617 745 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 TEAD4Q15561 434 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 SYT16Q17RD7 645 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 IL27RAQ6UWB1 636 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 ADCK2Q7Z695 626 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 LAPTM4BQ86VI4 370 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 CBWD2Q8IUF1 395 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 FOXRED2Q8IWF2 684 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 KATNAL2Q8IYT4 538 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 PCDH19Q8TAB3 1148 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 C7orf50Q9BRJ6 194 aaKnown RBP8.76□□□□□ -1.01
YBX3-208ENST00000540447 GPATCH2LQ9NWQ4 482 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 TRPC4Q9UBN4 977 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 EBF1Q9UH73 591 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 SLC25A13Q9UJS0 675 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 GPATCH8Q9UKJ3 1502 aaKnown RBP8.76□□□□□ -1.01
YBX3-208ENST00000540447 ASTN2O75129 1339 aaPredicted RBP8.76□□□□□ -1.01
YBX3-208ENST00000540447 RFPL1O75677 317 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 RASGRP1O95267 797 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 HGFP14210 728 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 FMO3P31513 532 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 NNMTP40261 264 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 STARD3Q14849 445 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 BATFQ16520 125 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 TMEM236Q5W0B7 351 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 MTSS1LQ765P7 747 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 PIAS4Q8N2W9 510 aaPredicted RBP8.76□□□□□ -1.01
YBX3-208ENST00000540447 RASGEF1CQ8N431 466 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 MARVELD2Q8N4S9 558 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 RAB42Q8N4Z0 105 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 FAM83DQ9H4H8 585 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 SSU72Q9NP77 194 aaKnown RBP8.76□□□□□ -1.01
YBX3-208ENST00000540447 SETD4Q9NVD3 440 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 PIH1D1Q9NWS0 290 aaKnown RBP8.76□□□□□ -1.01
YBX3-208ENST00000540447 MYPNQ86TC9 1320 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 KDM5BQ9UGL1 1544 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 CYP3A7-CYP3A51PA0A087WV96 503 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 USP17L10C9JJH3 530 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 RASA1P20936 1047 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 CYP3A7P24462 503 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 GTF2E2P29084 291 aaKnown RBP8.76□□□□□ -1.01
YBX3-208ENST00000540447 TUBP50607 506 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 LIMK2P53671 638 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 RPL19P84098 196 aaKnown RBP8.76□□□□□ -1.01
YBX3-208ENST00000540447 MPP1Q00013 466 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 GRB10Q13322 594 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 GFOD2Q3B7J2 385 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 IL23RQ5VWK5 629 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 PLA2G4FQ68DD2 849 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 EIF5AL1Q6IS14 154 aaKnown RBP8.76□□□□□ -1.01
YBX3-208ENST00000540447 PIWIL4Q7Z3Z4 852 aaKnown RBP8.76□□□□□ -1.01
YBX3-208ENST00000540447 ZC3HC1Q86WB0 502 aaKnown RBP8.76□□□□□ -1.01
YBX3-208ENST00000540447 AGBL3Q8NEM8 1001 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 OR5H6Q8NGV6 325 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 SLC9A6Q92581 669 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 CGREF1Q99674 301 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 PKP2Q99959 881 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 ITPAQ9BY32 194 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 MIR1-1HGQ9H1L0 117 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 KCTD5Q9NXV2 234 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 RIMKLBQ9ULI2 386 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 EIF3FO00303 357 aaPredicted RBP8.76□□□□□ -1.01
YBX3-208ENST00000540447 LIASO43766 372 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 ABCB7O75027 752 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 TULP3O75386 442 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 CRHR1P34998 444 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 IL6STP40189 918 aaPredicted RBP8.76□□□□□ -1.01
YBX3-208ENST00000540447 MATKP42679 507 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 CCNA1P78396 465 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 NIPAL4Q0D2K0 466 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 BTBD8Q5XKL5 378 aa8.76□□□□□ -1.01
YBX3-208ENST00000540447 C16orf86Q6ZW13 317 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms