RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 GPR34Q9UPC5 381 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 PCDHB1Q9Y5F3 818 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 MATN3O15232 486 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 MFSD11O43934 449 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 PGLSO95336 258 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 PDHA1P08559 390 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 TMEM253P0C7T8 217 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 CCNB1P14635 433 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 MX2P20592 715 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 CES1P23141 567 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 KDELR1P24390 212 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 TRIM23P36406 574 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 ETV3P41162 512 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 ARHGAP25P42331 645 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 ARSEP51690 589 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 KIAA1024LP59773 190 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 GABREP78334 506 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 GALNT2Q10471 571 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 TRAF2Q12933 501 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 SPIDRQ14159 915 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 PAFAH1B3Q15102 231 aaKnown RBP9.02□□□□□ -0.97
LMO3-222ENST00000540445 PTPRRQ15256 657 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 ASTE1Q2TB18 679 aaPredicted RBP9.02□□□□□ -0.97
LMO3-222ENST00000540445 PERM1Q5SV97 790 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 NCBP2-AS2Q69YL0 99 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 FOXR1Q6PIV2 292 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 RBM44Q6ZP01 1051 aaKnown RBP9.02□□□□□ -0.97
LMO3-222ENST00000540445 NYAP1Q6ZVC0 841 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 USP45Q70EL2 814 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 VSTM4Q8IW00 320 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 SLC35F3Q8IY50 421 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 LSMEM2Q8N112 164 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 TEX26Q8N6G2 289 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 ARL10Q8N8L6 244 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 FAM46DQ8NEK8 389 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.02□□□□□ -0.97
LMO3-222ENST00000540445 SCRN2Q96FV2 425 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 COQ10AQ96MF6 247 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 ZNF830Q96NB3 372 aaPredicted RBP9.02□□□□□ -0.97
LMO3-222ENST00000540445 BBC3Q96PG8 261 aaPredicted RBP9.02□□□□□ -0.97
LMO3-222ENST00000540445 CCDC3Q9BQI4 270 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 ZNF670Q9BS34 389 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 LGR4Q9BXB1 951 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 POLR1EQ9GZS1 481 aaKnown RBP9.02□□□□□ -0.97
LMO3-222ENST00000540445 DPEP2Q9H4A9 486 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 WDR26Q9H7D7 661 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 PHPT1Q9NRX4 125 aaPredicted RBP9.02□□□□□ -0.97
LMO3-222ENST00000540445 SPTLC3Q9NUV7 552 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 NENFQ9UMX5 172 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 HEY1Q9Y5J3 304 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 RAI2Q9Y5P3 530 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 DGKBQ9Y6T7 804 aa9.02□□□□□ -0.97
LMO3-222ENST00000540445 FASNP49327 2511 aaKnown RBP9.02□□□□□ -0.97
LMO3-222ENST00000540445 A0A0U1RQS6 177 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 LRRD1A4D1F6 860 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 NPIPB15A6NHN6 443 aaPredicted RBP9.01□□□□□ -0.97
LMO3-222ENST00000540445 AKR1B15C9JRZ8 316 aaPredicted RBP9.01□□□□□ -0.97
LMO3-222ENST00000540445 TNFRSF10CO14798 259 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 HEXIM1O94992 359 aaKnown RBP9.01□□□□□ -0.97
LMO3-222ENST00000540445 HOXC4P09017 264 aaPredicted RBP9.01□□□□□ -0.97
LMO3-222ENST00000540445 MYCLP1P12525 358 aaPredicted RBP9.01□□□□□ -0.97
LMO3-222ENST00000540445 GM2AP17900 193 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 CA4P22748 312 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 ITPKBP27987 946 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 RBMS1P29558 406 aaKnown RBP9.01□□□□□ -0.97
LMO3-222ENST00000540445 MAN1A1P33908 653 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 ABCG1P45844 678 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 NOP2P46087 812 aaKnown RBP9.01□□□□□ -0.97
LMO3-222ENST00000540445 GPR1P46091 355 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 LSSP48449 732 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 DSC2Q02487 901 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 CCDC173Q0VFZ6 552 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 AP1B1Q10567 949 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 CNGA3Q16281 694 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 ISXQ2M1V0 245 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 TBC1D25Q3MII6 688 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 C3orf38Q5JPI3 329 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 RAET1GQ6H3X3 334 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 Q6ZVL8 140 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 HSD11B1LQ7Z5J1 315 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 TSPAN33Q86UF1 283 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 HEATR4Q86WZ0 1026 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 CNGA4Q8IV77 575 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 RHOT2Q8IXI1 618 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 KYQ8NBH2 561 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 OR6C4Q8NGE1 309 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 WDR48Q8TAF3 677 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 PIH1D2Q8WWB5 315 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 OR1E3Q8WZA6 343 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 RAPGEF5Q92565 580 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 AP2M1Q96CW1 435 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 PDXPQ96GD0 296 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 ATXN7L3BQ96GX2 97 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 NAF1Q96HR8 494 aaKnown RBP9.01□□□□□ -0.97
LMO3-222ENST00000540445 TSGA13Q96PP4 275 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 RNF157Q96PX1 679 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 RBM15Q96T37 977 aaKnown RBP eCLIP9.01□□□□□ -0.97
LMO3-222ENST00000540445 TRIM5Q9C035 493 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 TMEM168Q9H0V1 697 aa9.01□□□□□ -0.97
LMO3-222ENST00000540445 PRORYQ9H606 182 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms