RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 DAGLAQ9Y4D2 1042 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 TYW3Q6IPR3 259 aaKnown RBP11.09□□□□□ -0.63
PBX1-212ENST00000540236 NAPRTQ6XQN6 538 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 EIF3MQ7L2H7 374 aaKnown RBP11.09□□□□□ -0.63
PBX1-212ENST00000540236 AMER2Q8N7J2 671 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.09□□□□□ -0.63
PBX1-212ENST00000540236 BOLLQ8N9W6 283 aaKnown RBP11.09□□□□□ -0.63
PBX1-212ENST00000540236 OR9Q1Q8NGQ5 310 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 ACDQ96AP0 544 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 CENPNQ96H22 339 aaPredicted RBP11.09□□□□□ -0.63
PBX1-212ENST00000540236 PAWRQ96IZ0 340 aaKnown RBP11.09□□□□□ -0.63
PBX1-212ENST00000540236 DIABLOQ9NR28 239 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 SCAMP1O15126 338 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 TADA2AO75478 443 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 ATP5BP06576 529 aaKnown RBP11.09□□□□□ -0.63
PBX1-212ENST00000540236 GPD1P21695 349 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 YWHAQP27348 245 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 CAPZA2P47755 286 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 POU6F1Q14863 301 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 FAM205BPQ63HN1 556 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 MXRA8Q9BRK3 442 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 EVLQ9UI08 416 aaPredicted RBP11.09□□□□□ -0.63
PBX1-212ENST00000540236 PPLO60437 1756 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 METTL21EPA6NDL7 271 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 H2AFYO75367 372 aaKnown RBP11.09□□□□□ -0.63
PBX1-212ENST00000540236 JRKO75564 520 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 FGF3P11487 239 aaPredicted RBP11.09□□□□□ -0.63
PBX1-212ENST00000540236 MIPP30301 263 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 SULT1E1P49888 294 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 AP2S1P53680 142 aaPredicted RBP11.09□□□□□ -0.63
PBX1-212ENST00000540236 ANGPT1Q15389 498 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 GRTP1Q5TC63 336 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 PKN3Q6P5Z2 889 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 CRTC1Q6UUV9 634 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 ADGRG6Q86SQ4 1221 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 RASAL3Q86YV0 1011 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 PPHLN1Q8NEY8 458 aaKnown RBP11.09□□□□□ -0.63
PBX1-212ENST00000540236 TMEM74Q96NL1 305 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 QKIQ96PU8 341 aaKnown RBP eCLIP11.09□□□□□ -0.63
PBX1-212ENST00000540236 RACGAP1Q9H0H5 632 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 VPS28Q9UK41 221 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 ABCG2Q9UNQ0 655 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 ASTN2O75129 1339 aaPredicted RBP11.09□□□□□ -0.63
PBX1-212ENST00000540236 DISP2A7MBM2 1401 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 ERI2A8K979 691 aaKnown RBP11.09□□□□□ -0.63
PBX1-212ENST00000540236 IFNA16P05015 189 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 PROS1P07225 676 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 CXCR2P25025 360 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 PSMB4P28070 264 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 SLC7A1P30825 629 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 TMBIM6P55061 237 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 APOFQ13790 326 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 GLYATQ6IB77 296 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 VPS33BQ9H267 617 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 CRISPLD1Q9H336 500 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 IMPAD1Q9NX62 359 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 PPEF1O14829 653 aaPredicted RBP11.09□□□□□ -0.63
PBX1-212ENST00000540236 CYP2F1P24903 491 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 FLYWCH1Q4VC44 716 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 PPP4R4Q6NUP7 873 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 KRT74Q7RTS7 529 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 JOSD2Q8TAC2 188 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 ASB9Q96DX5 294 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 FEM1CQ96JP0 617 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 AIFM2Q9BRQ8 373 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 NKIRAS2Q9NYR9 191 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 RAP2CQ9Y3L5 183 aa11.09□□□□□ -0.63
PBX1-212ENST00000540236 TTLL8A6PVC2 850 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 CD1EP15812 388 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 IVDP26440 423 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 SSTR2P30874 369 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 TRIM71Q2Q1W2 868 aaKnown RBP11.08□□□□□ -0.64
PBX1-212ENST00000540236 C5orf22Q49AR2 442 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 ABRAQ8N0Z2 381 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 SYNPOQ8N3V7 929 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 ZNF431Q8TF32 576 aaPredicted RBP11.08□□□□□ -0.64
PBX1-212ENST00000540236 RELTQ969Z4 430 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 OLAHQ9NV23 265 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 AFDNP55196 1824 aaKnown RBP11.08□□□□□ -0.64
PBX1-212ENST00000540236 MPOP05164 745 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 YWHAEP62258 255 aaKnown RBP11.08□□□□□ -0.64
PBX1-212ENST00000540236 PFKPQ01813 784 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 TRAP1Q12931 704 aaKnown RBP11.08□□□□□ -0.64
PBX1-212ENST00000540236 TEX44Q53QW1 395 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 EPGNQ6UW88 154 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 ANKS1BQ7Z6G8 1248 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 CIR1Q86X95 450 aaPredicted RBP11.08□□□□□ -0.64
PBX1-212ENST00000540236 CCDC185Q8N715 623 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 C3orf58Q8NDZ4 430 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 PIK3C3Q8NEB9 887 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 ZNF420Q8TAQ5 688 aaPredicted RBP11.08□□□□□ -0.64
PBX1-212ENST00000540236 TMBIM1Q969X1 311 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 DIRAS2Q96HU8 199 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 SLC25A23Q9BV35 468 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 SSU72Q9NP77 194 aaKnown RBP11.08□□□□□ -0.64
PBX1-212ENST00000540236 QPCTLQ9NXS2 382 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 XPR1Q9UBH6 696 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 TSPAN3O60637 253 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 UPK1BO75841 260 aa11.08□□□□□ -0.64
PBX1-212ENST00000540236 PGK2P07205 417 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms