RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 TBC1D4O60343 1298 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 SNNO75324 88 aaPredicted RBP8.71□□□□□ -1.02
DDB1-217ENST00000540166 CST3P01034 146 aaPredicted RBP8.71□□□□□ -1.02
DDB1-217ENST00000540166 ITGB1P05556 798 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 RPL10P27635 214 aaKnown RBP8.71□□□□□ -1.02
DDB1-217ENST00000540166 MIPP30301 263 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 YAP1P46937 504 aaKnown RBP8.71□□□□□ -1.02
DDB1-217ENST00000540166 RAP1GAPP47736 663 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 CLK1P49759 484 aaKnown RBP8.71□□□□□ -1.02
DDB1-217ENST00000540166 RGS7P49802 495 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 RPL14P50914 215 aaKnown RBP8.71□□□□□ -1.02
DDB1-217ENST00000540166 HNRNPFP52597 415 aaKnown RBP8.71□□□□□ -1.02
DDB1-217ENST00000540166 VAC14Q08AM6 782 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 PRKAA1Q13131 559 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 CEACAM7Q14002 265 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 FAM26DQ5JW98 314 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 C4orf22Q6V702 233 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 GET4Q7L5D6 327 aaPredicted RBP8.71□□□□□ -1.02
DDB1-217ENST00000540166 MICU2Q8IYU8 434 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 JOSD2Q8TAC2 188 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 KBTBD7Q8WVZ9 684 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 CEP19Q96LK0 163 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 ZNF518BQ9C0D4 1074 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 RNF11Q9Y3C5 154 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 FARP1Q9Y4F1 1045 aaPredicted RBP8.71□□□□□ -1.02
DDB1-217ENST00000540166 ORC6Q9Y5N6 252 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 FAM149AA5PLN7 773 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 ZSCAN5BA6NJL1 495 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 TRPC5OSA6NMA1 111 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 H0YJX3 145 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 APOL1O14791 398 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 SNX2O60749 519 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 H2AFYO75367 372 aaKnown RBP8.7□□□□□ -1.02
DDB1-217ENST00000540166 RFPL1O75677 317 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 PIGNO95427 931 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 LSM8O95777 96 aaKnown RBP8.7□□□□□ -1.02
DDB1-217ENST00000540166 CSH1P0DML2 217 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 CSH2P0DML3 217 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 MAGP20916 626 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 ENDOUP21128 410 aaKnown RBP8.7□□□□□ -1.02
DDB1-217ENST00000540166 MZF1P28698 734 aaPredicted RBP8.7□□□□□ -1.02
DDB1-217ENST00000540166 SEPHS1P49903 392 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 CDH8P55286 799 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 SURF1Q15526 300 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 KYAT1Q16773 422 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 TEX44Q53QW1 395 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 HEATR6Q6AI08 1181 aaKnown RBP8.7□□□□□ -1.02
DDB1-217ENST00000540166 ANKRD26P1Q6NSI1 321 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 CHST15Q7LFX5 561 aaPredicted RBP8.7□□□□□ -1.02
DDB1-217ENST00000540166 SLC22A16Q86VW1 577 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 CDKL3Q8IVW4 592 aaPredicted RBP8.7□□□□□ -1.02
DDB1-217ENST00000540166 LILRA2Q8N149 483 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 ZNF555Q8NEP9 628 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 LILRB4Q8NHJ6 448 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 SPAG4Q9NPE6 437 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 TBC1D13Q9NVG8 400 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 TEKT2Q9UIF3 430 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 C7orf72A4D263 438 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 SOBPA7XYQ1 873 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 PTGES3LE9PB15 166 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 MRASO14807 208 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 ATG7O95352 703 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 CLIC3O95833 236 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 FCGR1AP12314 374 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 HOXD8P13378 290 aaPredicted RBP8.7□□□□□ -1.02
DDB1-217ENST00000540166 SLC7A1P30825 629 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 AP3M2P53677 418 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 YWHAZP63104 245 aaKnown RBP8.7□□□□□ -1.02
DDB1-217ENST00000540166 MS4A2Q01362 244 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 CD300CQ08708 224 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 SMAD4Q13485 552 aaKnown RBP8.7□□□□□ -1.02
DDB1-217ENST00000540166 MBTPS1Q14703 1052 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 SMU1Q2TAY7 513 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 ZIK1Q3SY52 487 aaPredicted RBP8.7□□□□□ -1.02
DDB1-217ENST00000540166 AASDHQ4L235 1098 aaPredicted RBP8.7□□□□□ -1.02
DDB1-217ENST00000540166 CTXN3Q4LDR2 81 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 DENND1BQ6P3S1 775 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 UNC5AQ6ZN44 842 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 CCDC81Q6ZN84 652 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 ITIH5Q86UX2 942 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 ZNF597Q96LX8 424 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 OR52B2Q96RD2 323 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 KLHL3Q9UH77 587 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 B3GNT3Q9Y2A9 372 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 E7ESA3 106 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 ANGPT2O15123 496 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 INPP4BO15327 924 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 NCAM2O15394 837 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 PAPSS1O43252 624 aaPredicted RBP8.7□□□□□ -1.02
DDB1-217ENST00000540166 SDC4P31431 198 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 ECT2LQ008S8 904 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 RHDQ02161 417 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 OGDHQ02218 1023 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 ARHGAP15Q53QZ3 475 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 MBLAC2Q68D91 279 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 NEK5Q6P3R8 708 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 RAVER1Q8IY67 606 aaKnown RBP8.7□□□□□ -1.02
DDB1-217ENST00000540166 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.7□□□□□ -1.02
DDB1-217ENST00000540166 OR7G1Q8NGA0 311 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 OSCP1Q8WVF1 389 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms