RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 RPL9P32969 192 aaKnown RBP13.67□□□□□ -0.22
BNIP3-202ENST00000540159 TAF10Q12962 218 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 TRIM25Q14258 630 aaKnown RBP13.67□□□□□ -0.22
BNIP3-202ENST00000540159 ZNF235Q14590 738 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 RPS6KA2Q15349 733 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 BRMS1LQ5PSV4 323 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 ARTNQ5T4W7 220 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 ARMC3Q5W041 872 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 TIGD7Q6NT04 549 aaPredicted RBP13.67□□□□□ -0.22
BNIP3-202ENST00000540159 CPSF7Q8N684 471 aaKnown RBP13.67□□□□□ -0.22
BNIP3-202ENST00000540159 IRGQQ8WZA9 623 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 C19orf60Q96EN9 201 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 IMP4Q96G21 291 aaKnown RBP13.67□□□□□ -0.22
BNIP3-202ENST00000540159 ACOX2Q99424 681 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 ZYG11BQ9C0D3 744 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 CRISPLD1Q9H336 500 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 TBC1D13Q9NVG8 400 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 IKZF3Q9UKT9 509 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 A0A0J9YYE9 177 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 A0A0U1RQF3 1178 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 SLCO1B7G3V0H7 640 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 PSMD3O43242 534 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 CACNG3O60359 315 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 RAMP2O60895 175 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 CRCPO75575 148 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 SLC2A3P11169 496 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 PFKPQ01813 784 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 MYLK3Q32MK0 819 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 UNC50Q53HI1 259 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 FUNDC1Q8IVP5 155 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 SERPINB11Q96P15 392 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 PKMYT1Q99640 499 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 TMEM79Q9BSE2 394 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 CCDC28BQ9BUN5 200 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 IQCF5A8MTL0 148 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 H3BSA7 217 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 NRP2O60462 931 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 GNAO1P09471 354 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 COL6A2P12110 1019 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 PLOD1Q02809 727 aaPredicted RBP13.66□□□□□ -0.22
BNIP3-202ENST00000540159 FAM171A1Q5VUB5 890 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 SERINC5Q86VE9 423 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 MFN1Q8IWA4 741 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 PELI3Q8N2H9 469 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 TMEM102Q8N9M5 508 aaPredicted RBP13.66□□□□□ -0.22
BNIP3-202ENST00000540159 SLCO4A1Q96BD0 722 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 FAM192AQ9GZU8 254 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 SPAG4Q9NPE6 437 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 EVLQ9UI08 416 aaPredicted RBP13.66□□□□□ -0.22
BNIP3-202ENST00000540159 ZNF236Q9UL36 1845 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 PRSS51A0A1B0GVH4 220 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 LDB2O43679 373 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 NPHS1O60500 1241 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 SRP72O76094 671 aaKnown RBP13.66□□□□□ -0.22
BNIP3-202ENST00000540159 ATP6V1B2P21281 511 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 PCSK6P29122 969 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 CCND3P30281 292 aaPredicted RBP13.66□□□□□ -0.22
BNIP3-202ENST00000540159 RGRP47804 291 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 STX1BP61266 288 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 SATB1Q01826 763 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 LRP8Q14114 963 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 ZNF678Q5SXM1 525 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 SMYD5Q6GMV2 418 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 SETD3Q86TU7 594 aaPredicted RBP13.66□□□□□ -0.22
BNIP3-202ENST00000540159 ZFP28Q8NHY6 868 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 EML4Q9HC35 981 aaKnown RBP13.66□□□□□ -0.22
BNIP3-202ENST00000540159 MARCH2Q9P0N8 246 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 SLAMF8Q9P0V8 285 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 CROTQ9UKG9 612 aa13.66□□□□□ -0.22
BNIP3-202ENST00000540159 ARHGEF37A1IGU5 675 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 CDC7O00311 574 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 CD3EAPO15446 510 aaKnown RBP13.65□□□□□ -0.22
BNIP3-202ENST00000540159 OR1I1O60431 355 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 CDK14O94921 469 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 GLP2RO95838 553 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 IRF1P10914 325 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 HGFP14210 728 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 RPS24P62847 133 aaKnown RBP13.65□□□□□ -0.22
BNIP3-202ENST00000540159 STX5Q13190 355 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 CRHR2Q13324 411 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 TSNQ15631 228 aaKnown RBP13.65□□□□□ -0.22
BNIP3-202ENST00000540159 AAK1Q2M2I8 961 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 RABL3Q5HYI8 236 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 KRT80Q6KB66 452 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 KLHDC10Q6PID8 442 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 PAQR3Q6TCH7 311 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 LINGO4Q6UY18 593 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 LZTR1Q8N653 840 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 MAELQ96JY0 434 aaKnown RBP13.65□□□□□ -0.22
BNIP3-202ENST00000540159 TEX37Q96LM6 180 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 ZBED2Q9BTP6 218 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 NACA2Q9H009 215 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 SLC45A1Q9Y2W3 748 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 PCDHGC4Q9Y5F7 938 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 XIRP2A4UGR9 3374 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 DNAH14Q0VDD8 3507 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 FAM58BPP0C7Q3 252 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 CAPN3P20807 821 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 LEPRP48357 1165 aaKnown RBP13.65□□□□□ -0.22
BNIP3-202ENST00000540159 MAPK10P53779 464 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms