RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 RAB7BQ96AH8 199 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 FAM131CQ96AQ9 280 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 MFSD3Q96ES6 412 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 SRPK1Q96SB4 655 aaKnown RBP18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 OMDQ99983 421 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 GPR63Q9BZJ6 419 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ZFYVE1Q9HBF4 777 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 NINJ2Q9NZG7 142 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ZC3H7BQ9UGR2 993 aaKnown RBP18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 FAM237BA0A1B0GVD1 139 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ERLIN1O75477 346 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CRTAMO95727 393 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 SLC4A1P02730 911 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ACADMP11310 421 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CYP2A6P11509 494 aaPredicted RBP18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PGAM1P18669 254 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 NMBRP28336 390 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PXNP49023 591 aaPredicted RBP18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 SUOXP51687 545 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PMS2P54278 862 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 UNC5AQ6ZN44 842 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TMEM135Q86UB9 458 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PGBD3Q8N328 593 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CFAP36Q96G28 342 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 IER2Q9BTL4 223 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 MRM3Q9HC36 420 aaKnown RBP18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 LRRC4CQ9HCJ2 640 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 BCCIPQ9P287 314 aaKnown RBP eCLIP18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 SLC2A6Q9UGQ3 507 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 EBF1Q9UH73 591 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 FADS3Q9Y5Q0 445 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 RPS6KL1Q9Y6S9 549 aa18.94■□□□□ 0.62
TNFRSF1A-213ENST00000540022 WDR87Q6ZQQ6 2873 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 K7ESF4 209 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 SP9P0CG40 484 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 H2AFXP16104 143 aaPredicted RBP18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 NFKBIAP25963 317 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CXCL12P48061 93 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 GPX6P59796 221 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PTSQ03393 145 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 DMWDQ09019 674 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ELP6Q0PNE2 266 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CNGA3Q16281 694 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ANKRD20A4Q4UJ75 823 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TSTD2Q5T7W7 516 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ESRP1Q6NXG1 681 aaKnown RBP18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CAPN12Q6ZSI9 719 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 USP30Q70CQ3 517 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CCNJLQ8IV13 435 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 OR13C4Q8NGS5 318 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 HNRNPLLQ8WVV9 542 aaKnown RBP18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 FCRL3Q96P31 734 aaPredicted RBP18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 NAT9Q9BTE0 207 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ITM2CQ9NQX7 267 aa18.93■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ANKRD36A6QL64 1941 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 C2orf81A6NN90 581 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ALDH1A2O94788 518 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 POLBP06746 335 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 C1SP09871 688 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 LPOP22079 712 aaPredicted RBP18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 SSTR1P30872 391 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 HMGCLP35914 325 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TPMTP51580 245 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ZNF140P52738 457 aaPredicted RBP18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CCDC15Q0P6D6 951 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CRYMQ14894 314 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ARMC3Q5W041 872 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 FBXO38Q6PIJ6 1188 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 LIPIQ6XZB0 460 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 MAMSTRQ6ZN01 415 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 KBTBD6Q86V97 674 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 RASSF3Q86WH2 238 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PALM2Q8IXS6 379 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ZNF669Q96BR6 464 aaPredicted RBP18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TREX1Q9NSU2 369 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 IL17CQ9P0M4 197 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 USP36Q9P275 1121 aaKnown RBP18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 FZD4Q9ULV1 537 aa18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 EP300Q09472 2414 aaPredicted RBP18.92■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ZCWPW2A0A1B0GU75 182 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 NEMP1O14524 444 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 LAMTOR5O43504 91 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 AP1G1O43747 822 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 USP1O94782 785 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PAPSS2O95340 614 aaPredicted RBP18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 APBB3O95704 486 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TTC4O95801 387 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ZNF30P17039 623 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 LAMB3Q13751 1172 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ARHGEF7Q14155 803 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TMEM52BQ4KMG9 183 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 BEND6Q5SZJ8 279 aaPredicted RBP18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 STEAP4Q687X5 459 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 MICALCLQ6ZW33 695 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TRMT10CQ7L0Y3 403 aaKnown RBP18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 NLRP9Q7RTR0 991 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 FAM124AQ86V42 546 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 OR4K2Q8NGD2 314 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 OR13J1Q8NGT2 312 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms