RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 Q8N9G6 341 aaPredicted RBP15.32■□□□□ 0.04
UBE3B-211ENST00000539843 CSPG4P5Q96PW8 444 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 MGME1Q9BQP7 344 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 ISCUQ9H1K1 167 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 FGF22Q9HCT0 170 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 SEPT10Q9P0V9 454 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 RCOR3Q9P2K3 495 aaPredicted RBP15.32■□□□□ 0.04
UBE3B-211ENST00000539843 LRIT1Q9P2V4 623 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 ANAPC7Q9UJX3 599 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 DNPEPQ9ULA0 475 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 PCDHGC4Q9Y5F7 938 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 RHPN2P1A8MT19 583 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 GOLGA6L19H0YKK7 550 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 MYO1FO00160 1098 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 HTRA2O43464 458 aaPredicted RBP15.31■□□□□ 0.04
UBE3B-211ENST00000539843 HEXIM1O94992 359 aaKnown RBP15.31■□□□□ 0.04
UBE3B-211ENST00000539843 PRB1P04280 392 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 TPM3P06753 285 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 SKILP12757 684 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 AMPD1P23109 780 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 UGT1A5P35504 534 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 EPHB1P54762 984 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 ITKQ08881 620 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 NFKBIBQ15653 356 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 CNGA3Q16281 694 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 TMEM164Q5U3C3 297 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 SPECC1LQ69YQ0 1117 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 TIGD7Q6NT04 549 aaPredicted RBP15.31■□□□□ 0.04
UBE3B-211ENST00000539843 HEATR4Q86WZ0 1026 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 SYN2Q92777 582 aaPredicted RBP15.31■□□□□ 0.04
UBE3B-211ENST00000539843 ANP32EQ9BTT0 268 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 FOXP3Q9BZS1 431 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 POLR1EQ9GZS1 481 aaKnown RBP15.31■□□□□ 0.04
UBE3B-211ENST00000539843 ZMYND15Q9H091 742 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 TMEM168Q9H0V1 697 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 CDH19Q9H159 772 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 MRPL40Q9NQ50 206 aaKnown RBP15.31■□□□□ 0.04
UBE3B-211ENST00000539843 PISDQ9UG56 409 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 LCMT1Q9UIC8 334 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 LOXL2Q9Y4K0 774 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 PCDHB11Q9Y5F2 797 aa15.31■□□□□ 0.04
UBE3B-211ENST00000539843 A0A1W2PQJ5 194 aa15.3■□□□□ 0.04
UBE3B-211ENST00000539843 SERPING1P05155 500 aa15.3■□□□□ 0.04
UBE3B-211ENST00000539843 RARAP10276 462 aa15.3■□□□□ 0.04
UBE3B-211ENST00000539843 CCNB1P14635 433 aa15.3■□□□□ 0.04
UBE3B-211ENST00000539843 IL1R2P27930 398 aa15.3■□□□□ 0.04
UBE3B-211ENST00000539843 PDX1P52945 283 aa15.3■□□□□ 0.04
UBE3B-211ENST00000539843 NR1I3Q14994 352 aa15.3■□□□□ 0.04
UBE3B-211ENST00000539843 CLPPQ16740 277 aaPredicted RBP15.3■□□□□ 0.04
UBE3B-211ENST00000539843 PHF19Q5T6S3 580 aa15.3■□□□□ 0.04
UBE3B-211ENST00000539843 OGFOD3Q6PK18 319 aa15.3■□□□□ 0.04
UBE3B-211ENST00000539843 CYP4V2Q6ZWL3 525 aaPredicted RBP15.3■□□□□ 0.04
UBE3B-211ENST00000539843 MAP7D3Q8IWC1 876 aa15.3■□□□□ 0.04
UBE3B-211ENST00000539843 NIPA2Q8N8Q9 360 aa15.3■□□□□ 0.04
UBE3B-211ENST00000539843 DTD2Q96FN9 168 aa15.3■□□□□ 0.04
UBE3B-211ENST00000539843 SCRN2Q96FV2 425 aa15.3■□□□□ 0.04
UBE3B-211ENST00000539843 PRR11Q96HE9 360 aaPredicted RBP15.3■□□□□ 0.04
UBE3B-211ENST00000539843 COQ10AQ96MF6 247 aa15.3■□□□□ 0.04
UBE3B-211ENST00000539843 CCNL2Q96S94 520 aaPredicted RBP15.3■□□□□ 0.04
UBE3B-211ENST00000539843 NUP85Q9BW27 656 aa15.3■□□□□ 0.04
UBE3B-211ENST00000539843 SUDS3Q9H7L9 328 aaPredicted RBP15.3■□□□□ 0.04
UBE3B-211ENST00000539843 NOD2Q9HC29 1040 aa15.3■□□□□ 0.04
UBE3B-211ENST00000539843 TRNAU1APQ9NX07 287 aaKnown RBP15.3■□□□□ 0.04
UBE3B-211ENST00000539843 RABGEF1Q9UJ41 708 aa15.3■□□□□ 0.04
UBE3B-211ENST00000539843 A0A1W2PQM1 296 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 K7ENP7 123 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 MAFKO60675 156 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 PGLSO95336 258 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 CR2P20023 1033 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 CES1P23141 567 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 TEAD1P28347 426 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 SLC5A2P31639 672 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 ETV3P41162 512 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 GPR1P46091 355 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 GNPDA1P46926 289 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 PPM1FP49593 454 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-211ENST00000539843 UBASH3AP57075 661 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 SKOR1P84550 965 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 ZBED6P86452 979 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 HLTFQ14527 1009 aaKnown RBP eCLIP15.29■□□□□ 0.04
UBE3B-211ENST00000539843 ZFYVE27Q5T4F4 411 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 E4F1Q66K89 784 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-211ENST00000539843 INO80CQ6PI98 192 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-211ENST00000539843 SPRED1Q7Z699 444 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 B3GNT8Q7Z7M8 397 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 PIM3Q86V86 326 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 ZSCAN1Q8NBB4 408 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 CCDC112Q8NEF3 446 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 ZDHHC1Q8WTX9 485 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 SNRNP27Q8WVK2 155 aaKnown RBP15.29■□□□□ 0.04
UBE3B-211ENST00000539843 ZNF830Q96NB3 372 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-211ENST00000539843 NAP1L5Q96NT1 182 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-211ENST00000539843 TEX101Q9BY14 249 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 THAP2Q9H0W7 228 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 PCDH18Q9HCL0 1135 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 NT5MQ9NPB1 228 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 ATXN7L1Q9ULK2 861 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-211ENST00000539843 TTLL3Q9Y4R7 772 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 RNF215Q9Y6U7 377 aa15.29■□□□□ 0.04
UBE3B-211ENST00000539843 NBEAQ8NFP9 2946 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms