RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 ZNF670Q9BS34 389 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 POLR1EQ9GZS1 481 aaKnown RBP12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 TMEM168Q9H0V1 697 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 ABHD10Q9NUJ1 306 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 RBM22Q9NW64 420 aaKnown RBP eCLIP12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 SATB2Q9UPW6 733 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 RAI2Q9Y5P3 530 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 LRP4O75096 1905 aa12.76□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 SSU72P8A0A1W2PR75 194 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 PRSS38A1L453 326 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 LRRD1A4D1F6 860 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 MATN3O15232 486 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 MFAP3LO75121 409 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 TMEM253P0C7T8 217 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 TNNT1P13805 278 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 TRIM23P36406 574 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 EPHB1P54762 984 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 IFI16Q16666 785 aaKnown RBP12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 ASTE1Q2TB18 679 aaPredicted RBP12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 RALGPS1Q5JS13 557 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 RAET1GQ6H3X3 334 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 LVRNQ6Q4G3 990 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 Q6ZVL8 140 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 SFTPA2Q8IWL1 248 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 SDR16C5Q8N3Y7 309 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 TEX26Q8N6G2 289 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 PQLC3Q8N755 202 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 FAM46DQ8NEK8 389 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 CCL4L1Q8NHW4 92 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 SNIP1Q8TAD8 396 aaKnown RBP12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 SLC35G2Q8TBE7 412 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 RAPGEF5Q92565 580 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 DTD2Q96FN9 168 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 CCDC42Q96M95 316 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 NHEJ1Q9H9Q4 299 aaPredicted RBP12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 POLR1BQ9H9Y6 1135 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 CARS2Q9HA77 564 aaKnown RBP12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 PHPT1Q9NRX4 125 aaPredicted RBP12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 CD84Q9UIB8 345 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 RABGEF1Q9UJ41 708 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 ENTPD2Q9Y5L3 495 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 DGKBQ9Y6T7 804 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 CHD6Q8TD26 2715 aa12.75□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 APC2O95996 2303 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 PMS2P1A4D2B8 440 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 HLA-DQB2P05538 268 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 MYCLP1P12525 358 aaPredicted RBP12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 KRT10P13645 584 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 CCNB1P14635 433 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 KDELR1P24390 212 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 CCNCP24863 283 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 MAN1A1P33908 653 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 CCL7P80098 99 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 SLC10A2Q12908 348 aaPredicted RBP12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 FAM182AQ5T1J6 154 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 LRRC66Q68CR7 880 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 DOK6Q6PKX4 331 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 RFLNAQ6ZTI6 216 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 NDUFAF2Q8N183 169 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 Q8N9G6 341 aaPredicted RBP12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 PIH1D2Q8WWB5 315 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 SPOCK2Q92563 424 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 MAML1Q92585 1016 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 SCRN2Q96FV2 425 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 ZNF830Q96NB3 372 aaPredicted RBP12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 LGMNQ99538 433 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 DPEP2Q9H4A9 486 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 LCMT1Q9UIC8 334 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 CHKBQ9Y259 395 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 HEY1Q9Y5J3 304 aa12.74□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 URB1O60287 2271 aaKnown RBP12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 KCNK1O00180 336 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 AGRPO00253 132 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 PDE2AO00408 941 aaPredicted RBP12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 TNFRSF10CO14798 259 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 TCEA3O75764 348 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 KRT1P04264 644 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 RPLP0P05388 317 aaKnown RBP12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 HOXC4P09017 264 aaPredicted RBP12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 MX2P20592 715 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 GPR1P46091 355 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 GNPDA1P46926 289 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 LSSP48449 732 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 POLD2P49005 469 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 PCBP4P57723 403 aaKnown RBP12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 CDK3Q00526 305 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 NIPAL4Q0D2K0 466 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 IHHQ14623 411 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 CCDC13Q8IYE1 715 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 LPCAT1Q8NF37 534 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 WDR48Q8TAF3 677 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 PTCD2Q8WV60 388 aaKnown RBP12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 FAF2Q96CS3 445 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 ZNF578Q96N58 590 aaPredicted RBP12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 RNF157Q96PX1 679 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 GFM1Q96RP9 751 aaKnown RBP12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 MCCC1Q96RQ3 725 aaPredicted RBP12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 EPB41L5Q9HCM4 733 aa12.73□□□□□ -0.37
TSPAN9-IT1-201ENST00000539784 HAUS2Q9NVX0 235 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms