RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 C2orf81A6NN90 581 aa15.44■□□□□ 0.06
DDB1-216ENST00000539739 BHMG1C9JSJ3 638 aaPredicted RBP15.44■□□□□ 0.06
DDB1-216ENST00000539739 PSMD11O00231 422 aa15.44■□□□□ 0.06
DDB1-216ENST00000539739 SPINT1O43278 529 aa15.44■□□□□ 0.06
DDB1-216ENST00000539739 RNGTTO60942 597 aaKnown RBP15.44■□□□□ 0.06
DDB1-216ENST00000539739 CLDN7O95471 211 aa15.44■□□□□ 0.06
DDB1-216ENST00000539739 CNR2P34972 360 aa15.44■□□□□ 0.06
DDB1-216ENST00000539739 LIG3P49916 1009 aa15.44■□□□□ 0.06
DDB1-216ENST00000539739 CUL1Q13616 776 aa15.44■□□□□ 0.06
DDB1-216ENST00000539739 POU6F1Q14863 301 aa15.44■□□□□ 0.06
DDB1-216ENST00000539739 PTPRRQ15256 657 aa15.44■□□□□ 0.06
DDB1-216ENST00000539739 TAF1AQ15573 450 aaPredicted RBP15.44■□□□□ 0.06
DDB1-216ENST00000539739 CNGA3Q16281 694 aa15.44■□□□□ 0.06
DDB1-216ENST00000539739 DNAJC21Q5F1R6 531 aaKnown RBP15.44■□□□□ 0.06
DDB1-216ENST00000539739 ZNF534Q76KX8 674 aa15.44■□□□□ 0.06
DDB1-216ENST00000539739 TSPAN33Q86UF1 283 aa15.44■□□□□ 0.06
DDB1-216ENST00000539739 FAM160A2Q8N612 972 aaPredicted RBP15.44■□□□□ 0.06
DDB1-216ENST00000539739 PRRX2Q99811 253 aa15.44■□□□□ 0.06
DDB1-216ENST00000539739 PCED1AQ9H1Q7 454 aa15.44■□□□□ 0.06
DDB1-216ENST00000539739 SPO11Q9Y5K1 396 aa15.44■□□□□ 0.06
DDB1-216ENST00000539739 A0A1W2PQU0 124 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 HEATR9A2RTY3 570 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 SDR42E2A6NKP2 422 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 LZTS3O60299 673 aaPredicted RBP15.43■□□□□ 0.06
DDB1-216ENST00000539739 MMP20O60882 483 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 PPFIA2O75334 1257 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 RPP40O75818 363 aaKnown RBP15.43■□□□□ 0.06
DDB1-216ENST00000539739 TM7SF2O76062 418 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 LHCGRP22888 699 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 ADRA1DP25100 572 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 RPL6Q02878 288 aaKnown RBP15.43■□□□□ 0.06
DDB1-216ENST00000539739 RALGDSQ12967 914 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 MSLNQ13421 630 aaPredicted RBP15.43■□□□□ 0.06
DDB1-216ENST00000539739 SEPT6Q14141 434 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 HLTFQ14527 1009 aaKnown RBP eCLIP15.43■□□□□ 0.06
DDB1-216ENST00000539739 TRADDQ15628 312 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 HIF1AQ16665 826 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 CERCAMQ5T4B2 595 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 DENND2CQ68D51 928 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 LYSMD3Q7Z3D4 306 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 HORMAD1Q86X24 394 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 RAVER1Q8IY67 606 aaKnown RBP15.43■□□□□ 0.06
DDB1-216ENST00000539739 FRMD1Q8N878 549 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 PPHLN1Q8NEY8 458 aaKnown RBP15.43■□□□□ 0.06
DDB1-216ENST00000539739 FBXO25Q8TCJ0 367 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 GAB3Q8WWW8 586 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 NELL1Q92832 810 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 SGSM3Q96HU1 749 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 FOXP3Q9BZS1 431 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 GDF3Q9NR23 364 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 PKD2L2Q9NZM6 624 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 SAMD15Q9P1V8 674 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 PKP3Q9Y446 797 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 NUMA1Q14980 2115 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 IGLON5A6NGN9 336 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 TP73O15350 636 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 AVILO75366 819 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 SLC4A1P02730 911 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 C6P13671 934 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 LPOP22079 712 aaPredicted RBP15.43■□□□□ 0.06
DDB1-216ENST00000539739 MGAT1P26572 445 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 HMGCLP35914 325 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 PTSQ03393 145 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 SGCGQ13326 291 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 ACOX1Q15067 660 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 CDKN3Q16667 212 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 PCID2Q5JVF3 399 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 ARMC3Q5W041 872 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 KIAA0895LQ68EN5 471 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 CASC4Q6P4E1 433 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 NLRP9Q7RTR0 991 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 TMC3Q7Z5M5 1100 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 TRIM69Q86WT6 500 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 ZCCHC9Q8N567 271 aaKnown RBP15.43■□□□□ 0.06
DDB1-216ENST00000539739 CADM4Q8NFZ8 388 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 RUBCNQ92622 972 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 RANBP9Q96S59 729 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 C6orf106Q9H6K1 298 aaPredicted RBP15.43■□□□□ 0.06
DDB1-216ENST00000539739 RAD18Q9NS91 495 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 KCTD5Q9NXV2 234 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 MTRF1LQ9UGC7 380 aaKnown RBP15.43■□□□□ 0.06
DDB1-216ENST00000539739 MBD1Q9UIS9 605 aaPredicted RBP15.43■□□□□ 0.06
DDB1-216ENST00000539739 PCDHGA2Q9Y5H1 932 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 ARL5AQ9Y689 179 aa15.43■□□□□ 0.06
DDB1-216ENST00000539739 KMT2EQ8IZD2 1858 aa15.42■□□□□ 0.06
DDB1-216ENST00000539739 A0A0U1RQS6 177 aa15.42■□□□□ 0.06
DDB1-216ENST00000539739 MAGEB16A2A368 324 aa15.42■□□□□ 0.06
DDB1-216ENST00000539739 AURKAO14965 403 aa15.42■□□□□ 0.06
DDB1-216ENST00000539739 STX7O15400 261 aaKnown RBP15.42■□□□□ 0.06
DDB1-216ENST00000539739 FSBPO95073 299 aa15.42■□□□□ 0.06
DDB1-216ENST00000539739 MAGEA3P43357 314 aa15.42■□□□□ 0.06
DDB1-216ENST00000539739 CCR5P51681 352 aa15.42■□□□□ 0.06
DDB1-216ENST00000539739 STC1P52823 247 aa15.42■□□□□ 0.06
DDB1-216ENST00000539739 IRX1P78414 480 aaPredicted RBP15.42■□□□□ 0.06
DDB1-216ENST00000539739 MTM1Q13496 603 aa15.42■□□□□ 0.06
DDB1-216ENST00000539739 BBS9Q3SYG4 887 aa15.42■□□□□ 0.06
DDB1-216ENST00000539739 SEL1L3Q68CR1 1132 aa15.42■□□□□ 0.06
DDB1-216ENST00000539739 ZDHHC24Q6UX98 284 aa15.42■□□□□ 0.06
DDB1-216ENST00000539739 CENPUQ71F23 418 aa15.42■□□□□ 0.06
DDB1-216ENST00000539739 LPCAT2Q7L5N7 544 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms