RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 BTN2A2Q8WVV5 523 aa15.03■□□□□ -0
USB1-203ENST00000539737 USP7Q93009 1102 aa15.03■□□□□ -0
USB1-203ENST00000539737 NAT6Q93015 286 aa15.03■□□□□ -0
USB1-203ENST00000539737 ISG20Q96AZ6 181 aaKnown RBP15.03■□□□□ -0
USB1-203ENST00000539737 SGF29Q96ES7 293 aa15.03■□□□□ -0
USB1-203ENST00000539737 CCDC97Q96F63 343 aaPredicted RBP15.03■□□□□ -0
USB1-203ENST00000539737 KCTD15Q96SI1 283 aaPredicted RBP15.03■□□□□ -0
USB1-203ENST00000539737 BAG1Q99933 345 aaPredicted RBP15.03■□□□□ -0
USB1-203ENST00000539737 LRRN3Q9H3W5 708 aa15.03■□□□□ -0
USB1-203ENST00000539737 NOL6Q9H6R4 1146 aaKnown RBP15.03■□□□□ -0
USB1-203ENST00000539737 ZWILCHQ9H900 591 aa15.03■□□□□ -0
USB1-203ENST00000539737 STARD5Q9NSY2 213 aa15.03■□□□□ -0
USB1-203ENST00000539737 UTP20O75691 2785 aaKnown RBP15.03■□□□□ -0
USB1-203ENST00000539737 TMCC1O94876 653 aa15.02■□□□□ -0
USB1-203ENST00000539737 NDUFA10O95299 355 aa15.02■□□□□ -0
USB1-203ENST00000539737 IL1R2P27930 398 aa15.02■□□□□ -0
USB1-203ENST00000539737 SSR1P43307 286 aaKnown RBP15.02■□□□□ -0
USB1-203ENST00000539737 HK3P52790 923 aa15.02■□□□□ -0
USB1-203ENST00000539737 TCEAL1Q15170 157 aa15.02■□□□□ -0
USB1-203ENST00000539737 DPYSL2Q16555 572 aa15.02■□□□□ -0
USB1-203ENST00000539737 SMTNL2Q2TAL5 461 aa15.02■□□□□ -0
USB1-203ENST00000539737 PPP6R3Q5H9R7 873 aaPredicted RBP15.02■□□□□ -0
USB1-203ENST00000539737 ZSWIM9Q86XI8 627 aa15.02■□□□□ -0
USB1-203ENST00000539737 PLPP6Q8IY26 295 aa15.02■□□□□ -0
USB1-203ENST00000539737 PELI3Q8N2H9 469 aa15.02■□□□□ -0
USB1-203ENST00000539737 CASKIN2Q8WXE0 1202 aa15.02■□□□□ -0
USB1-203ENST00000539737 GLMNQ92990 594 aa15.02■□□□□ -0
USB1-203ENST00000539737 RNF31Q96EP0 1072 aa15.02■□□□□ -0
USB1-203ENST00000539737 SEMA6CQ9H3T2 930 aa15.02■□□□□ -0
USB1-203ENST00000539737 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.02■□□□□ -0
USB1-203ENST00000539737 NCKIPSDQ9NZQ3 722 aa15.02■□□□□ -0
USB1-203ENST00000539737 GOLGA6L3A6NEY3 463 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 B4DGG1 531 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 C9orf172C9J069 976 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 H3BRJ5 948 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 DAPK3O43293 454 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 BUB1O43683 1085 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 POP4O95707 220 aaKnown RBP15.01□□□□□ -0.01
USB1-203ENST00000539737 JMJD7P0C870 316 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 CCL4P13236 92 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 CTSEP14091 401 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 ARL4AP40617 200 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 HCAR3P49019 387 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 PTK2BQ14289 1009 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 INPP5AQ14642 412 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 C16orf72Q14CZ0 275 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 CA9Q16790 459 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 PARP15Q460N3 678 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 RFX8Q6ZV50 586 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 LURAP1LQ8IV03 231 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 CCNJLQ8IV13 435 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 TXLNBQ8N3L3 684 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 OR1E3Q8WZA6 343 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 HSPH1Q92598 858 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 RAB7BQ96AH8 199 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 OSBPL1AQ9BXW6 950 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 RDH14Q9HBH5 336 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 PCDHA13Q9Y5I0 950 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 EPN1Q9Y6I3 576 aaPredicted RBP15.01□□□□□ -0.01
USB1-203ENST00000539737 RNF215Q9Y6U7 377 aa15.01□□□□□ -0.01
USB1-203ENST00000539737 ARHGEF17Q96PE2 2063 aaPredicted RBP15.01□□□□□ -0.01
USB1-203ENST00000539737 A0A0A6YYK5 440 aaPredicted RBP15□□□□□ -0.01
USB1-203ENST00000539737 TMEM202A6NGA9 273 aa15□□□□□ -0.01
USB1-203ENST00000539737 TMEM110-MUSTN1A8MSY1 372 aa15□□□□□ -0.01
USB1-203ENST00000539737 SUV39H1O43463 412 aa15□□□□□ -0.01
USB1-203ENST00000539737 GSRP00390 522 aa15□□□□□ -0.01
USB1-203ENST00000539737 KRT7P08729 469 aa15□□□□□ -0.01
USB1-203ENST00000539737 RARAP10276 462 aa15□□□□□ -0.01
USB1-203ENST00000539737 TCF4P15884 667 aa15□□□□□ -0.01
USB1-203ENST00000539737 XPAP23025 273 aaPredicted RBP15□□□□□ -0.01
USB1-203ENST00000539737 ARSDP51689 593 aa15□□□□□ -0.01
USB1-203ENST00000539737 HADHBP55084 474 aaKnown RBP15□□□□□ -0.01
USB1-203ENST00000539737 MAZP56270 477 aaKnown RBP15□□□□□ -0.01
USB1-203ENST00000539737 YBEYP58557 167 aaPredicted RBP15□□□□□ -0.01
USB1-203ENST00000539737 SRP54P61011 504 aaKnown RBP15□□□□□ -0.01
USB1-203ENST00000539737 KRT81Q14533 505 aa15□□□□□ -0.01
USB1-203ENST00000539737 MESDQ14696 234 aa15□□□□□ -0.01
USB1-203ENST00000539737 SKIDA1Q1XH10 827 aa15□□□□□ -0.01
USB1-203ENST00000539737 MANEAQ5SRI9 462 aa15□□□□□ -0.01
USB1-203ENST00000539737 PHF19Q5T6S3 580 aa15□□□□□ -0.01
USB1-203ENST00000539737 POLNQ7Z5Q5 900 aa15□□□□□ -0.01
USB1-203ENST00000539737 UMODL1-AS1Q8N2C9 162 aa15□□□□□ -0.01
USB1-203ENST00000539737 RCBTB1Q8NDN9 531 aa15□□□□□ -0.01
USB1-203ENST00000539737 PTCD2Q8WV60 388 aaKnown RBP15□□□□□ -0.01
USB1-203ENST00000539737 ASB12Q8WXK4 309 aa15□□□□□ -0.01
USB1-203ENST00000539737 CALR3Q96L12 384 aaKnown RBP15□□□□□ -0.01
USB1-203ENST00000539737 GDAP1L1Q96MZ0 367 aa15□□□□□ -0.01
USB1-203ENST00000539737 APOOQ9BUR5 198 aa15□□□□□ -0.01
USB1-203ENST00000539737 GRPEL1Q9HAV7 217 aa15□□□□□ -0.01
USB1-203ENST00000539737 FGF22Q9HCT0 170 aa15□□□□□ -0.01
USB1-203ENST00000539737 RCOR3Q9P2K3 495 aaPredicted RBP15□□□□□ -0.01
USB1-203ENST00000539737 KLQ9UEF7 1012 aa15□□□□□ -0.01
USB1-203ENST00000539737 PCDHGA7Q9Y5G6 932 aa15□□□□□ -0.01
USB1-203ENST00000539737 A8MX80 341 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 KDELR3O43731 214 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 RASGRP1O95267 797 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 IGSF6O95976 241 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 LIPCP11150 499 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 GJC1P36383 396 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 SLC1A1P43005 524 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms