RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 IGDCC3Q8IVU1 814 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 ZBED8Q8IZ13 594 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 CXorf40AQ8TE69 158 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 TOE1Q96GM8 510 aaKnown RBP23.51■■□□□ 1.35
TMEM260-202ENST00000538838 ZNF778Q96MU6 729 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 SGK2Q9HBY8 427 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 CHRAC1Q9NRG0 131 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 COQ6Q9Y2Z9 468 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 CEP192Q8TEP8 1941 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 H0Y858 1186 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 CTIFO43310 598 aaKnown RBP23.51■■□□□ 1.35
TMEM260-202ENST00000538838 FAM153BP0C7A2 387 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 C6P13671 934 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 CD6P30203 668 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 ZNF140P52738 457 aaPredicted RBP23.51■■□□□ 1.35
TMEM260-202ENST00000538838 STC1P52823 247 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 PTSQ03393 145 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 FAM153CQ494X1 144 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 HSD11B1LQ7Z5J1 315 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 TMC3Q7Z5M5 1100 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 EIF1ADQ8N9N8 165 aaKnown RBP23.51■■□□□ 1.35
TMEM260-202ENST00000538838 STAMBPL1Q96FJ0 436 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 PHACTR1Q9C0D0 580 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 PREBQ9HCU5 417 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 WSB2Q9NYS7 404 aaPredicted RBP23.51■■□□□ 1.35
TMEM260-202ENST00000538838 SOX13Q9UN79 622 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 TEX264Q9Y6I9 313 aa23.51■■□□□ 1.35
TMEM260-202ENST00000538838 TBC1D3DA0A087WVF3 549 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 TBC1D3IA0A087WXS9 549 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 TBC1D3EA0A087X179 549 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 TBC1D3KA0A087X1G2 549 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 TBC1D3FA6NER0 549 aaPredicted RBP23.5■■□□□ 1.35
TMEM260-202ENST00000538838 MROH6A6NGR9 719 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 C2orf81A6NN90 581 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 TBC1D3LB9A6J9 549 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 EIF3HO15372 352 aaKnown RBP eCLIP23.5■■□□□ 1.35
TMEM260-202ENST00000538838 RNGTTO60942 597 aaKnown RBP23.5■■□□□ 1.35
TMEM260-202ENST00000538838 SEMA4FO95754 770 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 TBC1D3HP0C7X1 549 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 OXTRP30559 389 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 PPP2CBP62714 309 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 PPP2CAP67775 309 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 SEL1L3Q68CR1 1132 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 TBC1D3GQ6DHY5 549 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 TBC1D3CQ6IPX1 549 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 TBC1D3Q8IZP1 549 aaPredicted RBP23.5■■□□□ 1.35
TMEM260-202ENST00000538838 FBXO36Q8NEA4 188 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 OR13C4Q8NGS5 318 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 KDM4CQ9H3R0 1056 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 BPIFA1Q9NP55 256 aa23.5■■□□□ 1.35
TMEM260-202ENST00000538838 ZFR2Q9UPR6 939 aaKnown RBP23.5■■□□□ 1.35
TMEM260-202ENST00000538838 PRR33A8MZF0 331 aa23.49■■□□□ 1.35
TMEM260-202ENST00000538838 GM2AP17900 193 aa23.49■■□□□ 1.35
TMEM260-202ENST00000538838 LPOP22079 712 aaPredicted RBP23.49■■□□□ 1.35
TMEM260-202ENST00000538838 HMGCLP35914 325 aa23.49■■□□□ 1.35
TMEM260-202ENST00000538838 CBLBQ13191 982 aa23.49■■□□□ 1.35
TMEM260-202ENST00000538838 TSTD2Q5T7W7 516 aa23.49■■□□□ 1.35
TMEM260-202ENST00000538838 CES3Q6UWW8 571 aa23.49■■□□□ 1.35
TMEM260-202ENST00000538838 RFLNAQ6ZTI6 216 aa23.49■■□□□ 1.35
TMEM260-202ENST00000538838 OR2T34Q8NGX1 318 aa23.49■■□□□ 1.35
TMEM260-202ENST00000538838 LRRC39Q96DD0 335 aa23.49■■□□□ 1.35
TMEM260-202ENST00000538838 DNAJC1Q96KC8 554 aaKnown RBP23.49■■□□□ 1.35
TMEM260-202ENST00000538838 EBNA1BP2Q99848 306 aaKnown RBP23.49■■□□□ 1.35
TMEM260-202ENST00000538838 KIFC1Q9BW19 673 aa23.49■■□□□ 1.35
TMEM260-202ENST00000538838 IL17CQ9P0M4 197 aa23.49■■□□□ 1.35
TMEM260-202ENST00000538838 SLC2A6Q9UGQ3 507 aa23.49■■□□□ 1.35
TMEM260-202ENST00000538838 RAB21Q9UL25 225 aa23.49■■□□□ 1.35
TMEM260-202ENST00000538838 A0A1W2PQU0 124 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 LRRC72A6NJI9 287 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 GPR37L1O60883 481 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 NMBRP28336 390 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 TMPRSS15P98073 1019 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 ACOX1Q15067 660 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 OR4K2Q8NGD2 314 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 PTCD2Q8WV60 388 aaKnown RBP23.48■■□□□ 1.35
TMEM260-202ENST00000538838 GPR174Q9BXC1 333 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 MRM3Q9HC36 420 aaKnown RBP23.48■■□□□ 1.35
TMEM260-202ENST00000538838 MBD1Q9UIS9 605 aaPredicted RBP23.48■■□□□ 1.35
TMEM260-202ENST00000538838 FBXO4Q9UKT5 387 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 CCDC163A0A0D9SF12 145 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 IGLON5A6NGN9 336 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 PSMD11O00231 422 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 CCL22O00626 93 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 STX7O15400 261 aaKnown RBP23.48■■□□□ 1.35
TMEM260-202ENST00000538838 PGAM1P18669 254 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 MCM3P25205 808 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 ETV3P41162 512 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 LAMB3Q13751 1172 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 TMEM259Q4ZIN3 620 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 USP39Q53GS9 565 aaKnown RBP23.48■■□□□ 1.35
TMEM260-202ENST00000538838 KIAA1161Q6NSJ0 714 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 MICALCLQ6ZW33 695 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 WDR5BQ86VZ2 330 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 CBARPQ8N350 705 aaPredicted RBP23.48■■□□□ 1.35
TMEM260-202ENST00000538838 ZNF669Q96BR6 464 aaPredicted RBP23.48■■□□□ 1.35
TMEM260-202ENST00000538838 MFSD3Q96ES6 412 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 CFAP36Q96G28 342 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 SPACA7Q96KW9 195 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 C9orf72Q96LT7 481 aa23.48■■□□□ 1.35
TMEM260-202ENST00000538838 COQ10AQ96MF6 247 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms