RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 IGDCC3Q8IVU1 814 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 OR4K2Q8NGD2 314 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 HDAC10Q969S8 669 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 RAB7BQ96AH8 199 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 MFSD3Q96ES6 412 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SCRN2Q96FV2 425 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ZIM3Q96PE6 472 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 FAM129BQ96TA1 746 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 GABRG3Q99928 467 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 FAM167BQ9BTA0 163 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 KIFC1Q9BW19 673 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 STMN4Q9H169 189 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 VIPAS39Q9H9C1 493 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TBC1D17Q9HA65 648 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 LTB4R2Q9NPC1 389 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PCDH12Q9NPG4 1184 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 IARS2Q9NSE4 1012 aaKnown RBP10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 NSMCE4AQ9NXX6 385 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PPM1HQ9ULR3 514 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 MMP17Q9ULZ9 603 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SPO11Q9Y5K1 396 aa10.68□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ATG2BQ96BY7 2078 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PRR23AA6NEV1 266 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 FAM47DPA6NHR8 397 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 MID1O15344 667 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 RGS16O15492 202 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 FZD6O60353 706 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PAPSS2O95340 614 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ELFN1P0C7U0 828 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ERVK-10P10266 1014 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ZNF30P17039 623 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SLCO1A2P46721 670 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 DGKEP52429 567 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 STARD6P59095 220 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 GPX6P59796 221 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 IHHQ14623 411 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ZDHHC20Q5W0Z9 365 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 MRNIPQ6NTE8 343 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PARS2Q7L3T8 475 aaKnown RBP10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PTAR1Q7Z6K3 402 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TSTD1Q8NFU3 115 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 OR2W6PQ8NHA6 318 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 OR14C36Q8NHC7 312 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 HMGB4Q8WW32 186 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ARRDC3Q96B67 414 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CERS2Q96G23 380 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 DNAJC1Q96KC8 554 aaKnown RBP10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 NSMCE3Q96MG7 304 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 WRAP53Q9BUR4 548 aaKnown RBP10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 FUT8Q9BYC5 575 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TXLNGYQ9BZA5 131 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ROPN1BQ9BZX4 212 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 RSPH9Q9H1X1 276 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PPCSQ9HAB8 311 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ROPN1Q9HAT0 212 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 NLE1Q9NVX2 485 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 WDR70Q9NW82 654 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 FBXL12Q9NXK8 326 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 B4GALT6Q9UBX8 382 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 APPL1Q9UKG1 709 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SARDHQ9UL12 918 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SCML1Q9UN30 329 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 KCTD3Q9Y597 815 aa10.67□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TBC1D3DA0A087WVF3 549 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TBC1D3IA0A087WXS9 549 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TBC1D3EA0A087X179 549 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TBC1D3KA0A087X1G2 549 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 IQANK1A0A1B0GTG1 560 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 A0A1W2PP55 124 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TCRBV9S1A1TA0A576 114 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 KRBA1A5PL33 1030 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TBC1D3FA6NER0 549 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ANTXRLA6NF34 631 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 NPIPB15A6NHN6 443 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TBC1D3LB9A6J9 549 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PLK4O00444 970 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 NDUFS3O75489 264 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TBC1D3HP0C7X1 549 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CHRNB1P11230 501 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ADRB3P13945 408 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 KRT15P19012 456 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ITGALP20701 1170 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TARSP26639 723 aaKnown RBP10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SPAM1P38567 509 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SLC12A2P55011 1212 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 RPS14P62263 151 aaKnown RBP10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CNTN1Q12860 1018 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SGCGQ13326 291 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 NAB1Q13506 487 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ENPP2Q13822 863 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CCINQ13939 588 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TMED2Q15363 201 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ZNF284Q2VY69 593 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 KBTBD12Q3ZCT8 623 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 HSP90AA5PQ58FG0 334 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 AARS2Q5JTZ9 985 aaKnown RBP10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 LRRC66Q68CR7 880 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TBC1D3GQ6DHY5 549 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 KIAA0930Q6ICG6 404 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TBC1D3CQ6IPX1 549 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms