RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 KIAA2013Q8IYS2 634 aa13.1□□□□□ -0.31
CHFR-216ENST00000538235 PDCD7Q8N8D1 485 aaKnown RBP13.1□□□□□ -0.31
CHFR-216ENST00000538235 CXorf40AQ8TE69 158 aa13.1□□□□□ -0.31
CHFR-216ENST00000538235 SCAMP4Q969E2 229 aa13.1□□□□□ -0.31
CHFR-216ENST00000538235 DTD2Q96FN9 168 aa13.1□□□□□ -0.31
CHFR-216ENST00000538235 FRMD8P1Q9BZ68 369 aaPredicted RBP13.1□□□□□ -0.31
CHFR-216ENST00000538235 ETNK1Q9HBU6 452 aa13.1□□□□□ -0.31
CHFR-216ENST00000538235 VPS45Q9NRW7 570 aa13.1□□□□□ -0.31
CHFR-216ENST00000538235 SHOC2Q9UQ13 582 aa13.1□□□□□ -0.31
CHFR-216ENST00000538235 DRG1Q9Y295 367 aaKnown RBP13.1□□□□□ -0.31
CHFR-216ENST00000538235 FNDC3AQ9Y2H6 1198 aaKnown RBP13.1□□□□□ -0.31
CHFR-216ENST00000538235 KCTD3Q9Y597 815 aa13.1□□□□□ -0.31
CHFR-216ENST00000538235 GAPDHSO14556 408 aaPredicted RBP13.09□□□□□ -0.31
CHFR-216ENST00000538235 BUD23O43709 281 aaKnown RBP13.09□□□□□ -0.31
CHFR-216ENST00000538235 TM7SF2O76062 418 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 TMEM63AO94886 807 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 SLC4A1P02730 911 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 PCCBP05166 539 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 XPAP23025 273 aaPredicted RBP13.09□□□□□ -0.31
CHFR-216ENST00000538235 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
CHFR-216ENST00000538235 VPS41P49754 854 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 SUOXP51687 545 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 NXPH1P58417 271 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 PFN3P60673 137 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 RPL26P61254 145 aaKnown RBP13.09□□□□□ -0.31
CHFR-216ENST00000538235 RACK1P63244 317 aaKnown RBP13.09□□□□□ -0.31
CHFR-216ENST00000538235 SFSWAPQ12872 951 aaKnown RBP13.09□□□□□ -0.31
CHFR-216ENST00000538235 SEMA5AQ13591 1074 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 DUOXA1Q1HG43 343 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 HS1BP3Q53T59 392 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 ANKRD22Q5VYY1 191 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 ITPRIPL1Q6GPH6 555 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 ERAP2Q6P179 960 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 KYAT3Q6YP21 454 aaKnown RBP13.09□□□□□ -0.31
CHFR-216ENST00000538235 ARHGEF18Q6ZSZ5 1173 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 USP45Q70EL2 814 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 ASB12Q8WXK4 309 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 CCDC97Q96F63 343 aaPredicted RBP13.09□□□□□ -0.31
CHFR-216ENST00000538235 LGR4Q9BXB1 951 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 AASDHPPTQ9NRN7 309 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 KLF15Q9UIH9 416 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 TMPRSS11EQ9UL52 423 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 RPL26L1Q9UNX3 145 aaKnown RBP13.09□□□□□ -0.31
CHFR-216ENST00000538235 DMTF1Q9Y222 760 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 PCYT1BQ9Y5K3 369 aaPredicted RBP13.09□□□□□ -0.31
CHFR-216ENST00000538235 SAR1BQ9Y6B6 198 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 SPEGQ15772 3267 aa13.09□□□□□ -0.31
CHFR-216ENST00000538235 ARHGEF17Q96PE2 2063 aaPredicted RBP13.08□□□□□ -0.32
CHFR-216ENST00000538235 C1orf232A0A0U1RR37 186 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 FADS2P1A8MWK0 482 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 PRAMEF26H0Y7S4 382 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 VILLO15195 856 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 AP2A1O95782 977 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 CD38P28907 300 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 HOXD12P35452 270 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 TERF1P54274 439 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 EPHB1P54762 984 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 GEMP55040 296 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 MTM1Q13496 603 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 ACOX1Q15067 660 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 PARP6Q2NL67 630 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 CCDC137Q6PK04 289 aaKnown RBP13.08□□□□□ -0.32
CHFR-216ENST00000538235 AGGF1Q8N302 714 aaeCLIP13.08□□□□□ -0.32
CHFR-216ENST00000538235 PAF1Q8N7H5 531 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 GPR26Q8NDV2 337 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 DENND6BQ8NEG7 585 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 MAGOHBQ96A72 148 aaKnown RBP13.08□□□□□ -0.32
CHFR-216ENST00000538235 RMDN1Q96DB5 314 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 LENG8Q96PV6 779 aaPredicted RBP13.08□□□□□ -0.32
CHFR-216ENST00000538235 TBL1YQ9BQ87 522 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 HINFPQ9BQA5 517 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 EDEM2Q9BV94 578 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 ABCG8Q9H221 673 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 TCEAL2Q9H3H9 227 aaPredicted RBP13.08□□□□□ -0.32
CHFR-216ENST00000538235 SLC6A14Q9UN76 642 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 ANKRD6Q9Y2G4 727 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 OR1A2Q9Y585 309 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 SPTBN4Q9H254 2564 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 PIKFYVEQ9Y2I7 2098 aa13.08□□□□□ -0.32
CHFR-216ENST00000538235 A0A1W2PQ67 120 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 CCL22O00626 93 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 ARHGAP33O14559 1287 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 TP73O15350 636 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 LRP3O75074 770 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 FUCA1P04066 466 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 THEGLP0DJG4 465 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 CYP2A6P11509 494 aaPredicted RBP13.07□□□□□ -0.32
CHFR-216ENST00000538235 TPH1P17752 444 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 AFF3P51826 1226 aaKnown RBP13.07□□□□□ -0.32
CHFR-216ENST00000538235 POLR2LP62875 67 aaKnown RBP13.07□□□□□ -0.32
CHFR-216ENST00000538235 IL9RQ01113 521 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 C2orf54Q08AI8 447 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 EIF2B5Q13144 721 aaKnown RBP13.07□□□□□ -0.32
CHFR-216ENST00000538235 FZD2Q14332 565 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 KCNJ11Q14654 390 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 ESRP1Q6NXG1 681 aaKnown RBP13.07□□□□□ -0.32
CHFR-216ENST00000538235 KANSL1Q7Z3B3 1105 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 TMC3Q7Z5M5 1100 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 PTAR1Q7Z6K3 402 aaPredicted RBP13.07□□□□□ -0.32
CHFR-216ENST00000538235 TRIM74Q86UV6 250 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms