RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 PTPRCAPQ14761 206 aa14.34□□□□□ -0.11
USP44-203ENST00000537435 UGT3A2Q3SY77 523 aa14.34□□□□□ -0.11
USP44-203ENST00000537435 MTX3Q5HYI7 312 aa14.34□□□□□ -0.11
USP44-203ENST00000537435 ZNF549Q6P9A3 640 aa14.34□□□□□ -0.11
USP44-203ENST00000537435 HACD2Q6Y1H2 254 aa14.34□□□□□ -0.11
USP44-203ENST00000537435 SPATA31D4Q6ZUB0 917 aa14.34□□□□□ -0.11
USP44-203ENST00000537435 AMIGO2Q86SJ2 522 aa14.34□□□□□ -0.11
USP44-203ENST00000537435 FUNDC1Q8IVP5 155 aa14.34□□□□□ -0.11
USP44-203ENST00000537435 CLYBLQ8N0X4 340 aa14.34□□□□□ -0.11
USP44-203ENST00000537435 NUP93Q8N1F7 819 aa14.34□□□□□ -0.11
USP44-203ENST00000537435 RIN3Q8TB24 985 aa14.34□□□□□ -0.11
USP44-203ENST00000537435 IGSF8Q969P0 613 aa14.34□□□□□ -0.11
USP44-203ENST00000537435 AKTIPQ9H8T0 292 aa14.34□□□□□ -0.11
USP44-203ENST00000537435 GMIPQ9P107 970 aa14.34□□□□□ -0.11
USP44-203ENST00000537435 GMPR2Q9P2T1 348 aaKnown RBP14.34□□□□□ -0.11
USP44-203ENST00000537435 LOC285095A0A1B0GVY8 99 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 CCDC160A6NGH7 325 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 PPP6CO00743 305 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 ACADVLP49748 655 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 USP46P62068 366 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 NFKB2Q00653 900 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 IKBKEQ14164 716 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 KIF19Q2TAC6 998 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 MYLK3Q32MK0 819 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 USP41Q3LFD5 358 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 PITRM1Q5JRX3 1037 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 RAP1GAP2Q684P5 730 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 CHERPQ8IWX8 916 aaKnown RBP14.33□□□□□ -0.12
USP44-203ENST00000537435 PTGR2Q8N8N7 351 aaPredicted RBP14.33□□□□□ -0.12
USP44-203ENST00000537435 TADA1Q96BN2 335 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 ZNF597Q96LX8 424 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 POLR3BQ9NW08 1133 aaPredicted RBP14.33□□□□□ -0.12
USP44-203ENST00000537435 DNAJC15Q9Y5T4 150 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 PTGDR2Q9Y5Y4 395 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 ARL5AQ9Y689 179 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 PATJQ8NI35 1801 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 TNPO2O14787 897 aaKnown RBP14.33□□□□□ -0.12
USP44-203ENST00000537435 B4GALT3O60512 393 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 SIX3O95343 332 aaPredicted RBP14.33□□□□□ -0.12
USP44-203ENST00000537435 TBX18O95935 607 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 GOT2P00505 430 aaKnown RBP14.33□□□□□ -0.12
USP44-203ENST00000537435 GPX3P22352 226 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 GRK4P32298 578 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 NME5P56597 212 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 MAP7Q14244 749 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 LPIN1Q14693 890 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 IL31Q6EBC2 164 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 HMBOX1Q6NT76 420 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 FBXL22Q6P050 247 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 KLHDC10Q6PID8 442 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 CIR1Q86X95 450 aaPredicted RBP14.33□□□□□ -0.12
USP44-203ENST00000537435 BLOC1S5Q8TDH9 187 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 SOCS4Q8WXH5 440 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 PBXIP1Q96AQ6 731 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 DUS3LQ96G46 650 aaKnown RBP14.33□□□□□ -0.12
USP44-203ENST00000537435 MPP4Q96JB8 637 aa14.33□□□□□ -0.12
USP44-203ENST00000537435 DNAJC1Q96KC8 554 aaKnown RBP14.33□□□□□ -0.12
USP44-203ENST00000537435 RBM38Q9H0Z9 239 aaKnown RBP14.33□□□□□ -0.12
USP44-203ENST00000537435 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.33□□□□□ -0.12
USP44-203ENST00000537435 CNOT6Q9ULM6 557 aaKnown RBP14.33□□□□□ -0.12
USP44-203ENST00000537435 TRPM7Q96QT4 1865 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 SCN10AQ9Y5Y9 1956 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 IGLV3-10A0A075B6K4 115 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 A0A0J9YYE9 177 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 A0A1B0GTW7 788 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 LRRC14BA6NHZ5 514 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 H0YJX3 145 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 CDK14O94921 469 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 GLP2RO95838 553 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
USP44-203ENST00000537435 TIAL1Q01085 375 aaKnown RBP eCLIP14.32□□□□□ -0.12
USP44-203ENST00000537435 GEN1Q17RS7 908 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 MAP7D1Q3KQU3 841 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 RETREG3Q86VR2 466 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 DHFR2Q86XF0 187 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 ATP6V0D2Q8N8Y2 350 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 SLC29A1Q99808 456 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 SEMA3CQ99985 751 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 FBXO44Q9H4M3 255 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 MID1IP1Q9NPA3 183 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 PTTG2Q9NZH5 202 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 GIMAP2Q9UG22 337 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 RNF11Q9Y3C5 154 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 MIA3Q5JRA6 1907 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 ZNF839A8K0R7 811 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 UBXN8O00124 270 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 NR5A2O00482 541 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 CD3EAPO15446 510 aaKnown RBP14.32□□□□□ -0.12
USP44-203ENST00000537435 RAMP2O60895 175 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 STAMBPO95630 424 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 FOXA1P55317 472 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 CREB5Q02930 508 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 SEMA3AQ14563 771 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 POLD3Q15054 466 aaPredicted RBP14.32□□□□□ -0.12
USP44-203ENST00000537435 CYTH1Q15438 398 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 OR4D1Q15615 310 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 C17orf99Q6UX52 265 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 MIB1Q86YT6 1006 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 PCYOX1LQ8NBM8 494 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 OR13C4Q8NGS5 318 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms