RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 GPR158Q5T848 1215 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 IL31Q6EBC2 164 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 CNKSR3Q6P9H4 555 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 AFTPHQ6ULP2 937 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 FBXW8Q8N3Y1 598 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 CCNYL1Q8N7R7 359 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 PNPLA1Q8N8W4 532 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 LPGAT1Q92604 370 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 CDKN2AIPNLQ96HQ2 116 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 UNKQ9C0B0 810 aaKnown RBP9.32□□□□□ -0.92
UBE3B-207ENST00000537063 MRGBPQ9NV56 204 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 MAFFQ9ULX9 164 aa9.32□□□□□ -0.92
UBE3B-207ENST00000537063 MTF2Q9Y483 593 aaPredicted RBP9.32□□□□□ -0.92
UBE3B-207ENST00000537063 HELZP42694 1942 aaKnown RBP9.31□□□□□ -0.92
UBE3B-207ENST00000537063 LUC7L3O95232 432 aaKnown RBP9.31□□□□□ -0.92
UBE3B-207ENST00000537063 RHOCP08134 193 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 ARF5P84085 180 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 CUL3Q13618 768 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 PTPRCAPQ14761 206 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 SETMARQ53H47 684 aaPredicted RBP9.31□□□□□ -0.92
UBE3B-207ENST00000537063 ZNF678Q5SXM1 525 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 SLC39A5Q6ZMH5 540 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 MDGA1Q8NFP4 955 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 GIMAP7Q8NHV1 300 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 DNAJC9Q8WXX5 260 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 N4BP2L2Q92802 583 aaPredicted RBP9.31□□□□□ -0.92
UBE3B-207ENST00000537063 FAM136AQ96C01 138 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 TCF12Q99081 682 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 BATF3Q9NR55 127 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 DNMT3BQ9UBC3 853 aaKnown RBP9.31□□□□□ -0.92
UBE3B-207ENST00000537063 COPG1Q9Y678 874 aaKnown RBP9.31□□□□□ -0.92
UBE3B-207ENST00000537063 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.31□□□□□ -0.92
UBE3B-207ENST00000537063 C2orf78A6NCI8 922 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 NEMP1O14524 444 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 CDC25CP30307 473 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 CCL23P55773 120 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 AP2B1P63010 937 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 TBL3Q12788 808 aaKnown RBP9.31□□□□□ -0.92
UBE3B-207ENST00000537063 ZNF177Q13360 481 aaPredicted RBP9.31□□□□□ -0.92
UBE3B-207ENST00000537063 CYHR1Q6ZMK1 362 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 Q6ZNB5 142 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 CUZD1Q86UP6 607 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 SNX32Q86XE0 403 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 SPNS2Q8IVW8 549 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 DEFB107AQ8IZN7 70 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 ADAMTS19Q8TE59 1207 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 SGF29Q96ES7 293 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 DDX50Q9BQ39 737 aaKnown RBP9.31□□□□□ -0.92
UBE3B-207ENST00000537063 S100A14Q9HCY8 104 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 TBX21Q9UL17 535 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 OR51B4Q9Y5P0 310 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 UBFD1O14562 309 aaKnown RBP9.31□□□□□ -0.92
UBE3B-207ENST00000537063 ABL2P42684 1182 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 VEGFBP49765 207 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 APLP1P51693 650 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 HERVK_113P63132 956 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 PEX6Q13608 980 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 PTK2BQ14289 1009 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 CCDC6Q16204 474 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 PDCD2Q16342 344 aaPredicted RBP9.31□□□□□ -0.92
UBE3B-207ENST00000537063 TCEAL8Q8IYN2 117 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 ATOH8Q96SQ7 321 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 ERVK-6Q9BXR3 956 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 TFB2MQ9H5Q4 396 aaKnown RBP9.31□□□□□ -0.92
UBE3B-207ENST00000537063 SCUBE2Q9NQ36 999 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 GKN1Q9NS71 199 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 LHX3Q9UBR4 397 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 POMPQ9Y244 141 aa9.31□□□□□ -0.92
UBE3B-207ENST00000537063 H7C0S8 307 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 MTHFD2P13995 350 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 HNRNPLP14866 589 aaKnown RBP eCLIP9.3□□□□□ -0.92
UBE3B-207ENST00000537063 CYLC2Q14093 348 aaPredicted RBP9.3□□□□□ -0.92
UBE3B-207ENST00000537063 UNC50Q53HI1 259 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 PPM1LQ5SGD2 360 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 TMEM198Q66K66 360 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 C16orf89Q6UX73 402 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 SDCCAG8Q86SQ7 713 aaPredicted RBP9.3□□□□□ -0.92
UBE3B-207ENST00000537063 GPR65Q8IYL9 337 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 CEP70Q8NHQ1 597 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 HMGCLL1Q8TB92 370 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 DEFB118Q96PH6 123 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 SHCBP1LQ9BZQ2 653 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 NACA2Q9H009 215 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 ALG9Q9H6U8 611 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 PPM1HQ9ULR3 514 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 CRYL1Q9Y2S2 319 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 OAS3Q9Y6K5 1087 aaKnown RBP9.3□□□□□ -0.92
UBE3B-207ENST00000537063 LOC100653049A0A140TA62 436 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 CCDC189A1A4V9 331 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 BUD23O43709 281 aaKnown RBP9.3□□□□□ -0.92
UBE3B-207ENST00000537063 KRT34O76011 436 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 C1QTNF8P60827 252 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 PLD1Q13393 1074 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 IKBKEQ14164 716 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 UGT3A2Q3SY77 523 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 INO80DQ53TQ3 878 aaPredicted RBP9.3□□□□□ -0.92
UBE3B-207ENST00000537063 RNF219Q5W0B1 726 aaPredicted RBP9.3□□□□□ -0.92
UBE3B-207ENST00000537063 NCEH1Q6PIU2 408 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 HERC6Q8IVU3 1022 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 TTC30BQ8N4P2 665 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms