RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 PDAP1Q13442 181 aaKnown RBP13.58□□□□□ -0.24
SMG6-203ENST00000536871 CDH18Q13634 790 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 RBBP5Q15291 538 aaKnown RBP13.58□□□□□ -0.24
SMG6-203ENST00000536871 MAPRE2Q15555 327 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 CCDC6Q16204 474 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 SLC9B1Q4ZJI4 515 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 CMPK2Q5EBM0 449 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 AAGABQ6PD74 315 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 NCEH1Q6PIU2 408 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 C16orf89Q6UX73 402 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 Q6ZNB5 142 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 ATG14Q6ZNE5 492 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 ULK2Q8IYT8 1036 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 LSMEM2Q8N112 164 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 ELMOD1Q8N336 334 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 TMEM199Q8N511 208 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 NKAPQ8N5F7 415 aaKnown RBP13.58□□□□□ -0.24
SMG6-203ENST00000536871 ACTRT2Q8TDY3 377 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.58□□□□□ -0.24
SMG6-203ENST00000536871 GCNAQ96QF7 691 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 SERPINI1Q99574 410 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 ETAA1Q9NY74 926 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 MARCH4Q9P2E8 410 aaPredicted RBP13.58□□□□□ -0.24
SMG6-203ENST00000536871 STX18Q9P2W9 335 aaKnown RBP13.58□□□□□ -0.24
SMG6-203ENST00000536871 BCAP29Q9UHQ4 241 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 ANGPTL2Q9UKU9 493 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 PRPF19Q9UMS4 504 aaKnown RBP13.58□□□□□ -0.24
SMG6-203ENST00000536871 CHD5Q8TDI0 1954 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 C2orf78A6NCI8 922 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 SYCE1LA8MT33 242 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 AURKAO14965 403 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 DCXO43602 365 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 CCNT2O60583 730 aaKnown RBP13.57□□□□□ -0.24
SMG6-203ENST00000536871 TBL1XO60907 577 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 FGF19O95750 216 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 F7P08709 466 aaPredicted RBP13.57□□□□□ -0.24
SMG6-203ENST00000536871 IRF1P10914 325 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 COX4I1P13073 169 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 ZNF37AP17032 561 aaPredicted RBP13.57□□□□□ -0.24
SMG6-203ENST00000536871 GNAZP19086 355 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 HDCP19113 662 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 CDC25CP30307 473 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 CPA2P48052 419 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 ACTR3P61158 418 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 SLC7A9P82251 487 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 ARF5P84085 180 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 BIRC2Q13490 618 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 ZNF789Q5FWF6 425 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 NAIF1Q69YI7 327 aaPredicted RBP13.57□□□□□ -0.24
SMG6-203ENST00000536871 FRMD7Q6ZUT3 714 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 ZNF557Q8N988 423 aaPredicted RBP13.57□□□□□ -0.24
SMG6-203ENST00000536871 KDM1BQ8NB78 822 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 OR52K2Q8NGK3 314 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 ZFRQ96KR1 1074 aaKnown RBP13.57□□□□□ -0.24
SMG6-203ENST00000536871 TTC1Q99614 292 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 FEM1AQ9BSK4 669 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 THTPAQ9BU02 230 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 DERL2Q9GZP9 239 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 ZDHHC2Q9UIJ5 367 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 VPS28Q9UK41 221 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 MIA3Q5JRA6 1907 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 TTC24A2A3L6 582 aaPredicted RBP13.57□□□□□ -0.24
SMG6-203ENST00000536871 LCHNA4D1U4 455 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 E9PBE3 544 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 STX7O15400 261 aaKnown RBP13.57□□□□□ -0.24
SMG6-203ENST00000536871 KLHL41O60662 606 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 LILRB3O75022 631 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 ENTPD5O75356 428 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 ZMPSTE24O75844 475 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 PSMG1O95456 288 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 LRG1P02750 347 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 CTSAP10619 480 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 INHBCP55103 352 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 CDKN2DP55273 166 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 RHOAP61586 193 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 WDR5P61964 334 aaKnown RBP13.57□□□□□ -0.24
SMG6-203ENST00000536871 BTKQ06187 659 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 RAD51Q06609 339 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 KPNB1Q14974 876 aaKnown RBP13.57□□□□□ -0.24
SMG6-203ENST00000536871 LSM12Q3MHD2 195 aaKnown RBP13.57□□□□□ -0.24
SMG6-203ENST00000536871 MPPE1Q53F39 396 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 VWA5B1Q5TIE3 1220 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 UGT3A1Q6NUS8 523 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 CERS6Q6ZMG9 384 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 HTR3DQ70Z44 454 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 ISCA2Q86U28 154 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 CARNMT1Q8N4J0 409 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 TET1Q8NFU7 2136 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 OR13C4Q8NGS5 318 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 STAG3L4Q8TBR4 150 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 ITFG2Q969R8 447 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 YME1L1Q96TA2 773 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 MAGEE1Q9HCI5 957 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 KCTD3Q9Y597 815 aa13.57□□□□□ -0.24
SMG6-203ENST00000536871 KIAA0355O15063 1070 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 TSPAN3O60637 253 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 VPS26AO75436 327 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 PRLP01236 227 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 CD1DP15813 335 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 GM2AP17900 193 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms