RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 FNIP1Q8TF40 1166 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 ARHGEF2Q92974 986 aaKnown RBP7.15□□□□□ -1.26
YBX3-206ENST00000536823 ISG20Q96AZ6 181 aaKnown RBP7.15□□□□□ -1.26
YBX3-206ENST00000536823 ARRDC3Q96B67 414 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 ZNF653Q96CK0 615 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 IQCDQ96DY2 449 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 SLC6A18Q96N87 628 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 MAGEB5Q9BZ81 275 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 TRIM7Q9C029 511 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 EBF2Q9HAK2 575 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 IL21RQ9HBE5 538 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 DYRK4Q9NR20 520 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 PARVAQ9NVD7 372 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 DNAI1Q9UI46 699 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 FZD10Q9ULW2 581 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 ANKRD6Q9Y2G4 727 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 PCDHGB2Q9Y5G2 931 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 SCINQ9Y6U3 715 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 CFAP47Q6ZTR5 3102 aa7.15□□□□□ -1.27
YBX3-206ENST00000536823 TBC1D3DA0A087WVF3 549 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 TBC1D3IA0A087WXS9 549 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 TBC1D3EA0A087X179 549 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 TBC1D3KA0A087X1G2 549 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 SPAARA0A1B0GVQ0 90 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 TBC1D3FA6NER0 549 aaPredicted RBP7.14□□□□□ -1.27
YBX3-206ENST00000536823 TMEM191CA6NGB0 347 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 WASH4PA8MWX3 477 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 EIF3CLB5ME19 914 aaKnown RBP7.14□□□□□ -1.27
YBX3-206ENST00000536823 TBC1D3LB9A6J9 549 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 H0Y8X5 98 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 FGF10O15520 208 aaPredicted RBP7.14□□□□□ -1.27
YBX3-206ENST00000536823 FLRT2O43155 660 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 CREB3O43889 395 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 SH3BP5O60239 455 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 GSRP00390 522 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 TBC1D3HP0C7X1 549 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 MYBL1P10243 752 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 SKILP12757 684 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 PSMA2P25787 234 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 CCT8P50990 548 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 CCNHP51946 323 aaPredicted RBP7.14□□□□□ -1.27
YBX3-206ENST00000536823 C21orf59P57076 290 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 YBEYP58557 167 aaPredicted RBP7.14□□□□□ -1.27
YBX3-206ENST00000536823 TAS2R38P59533 333 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 TPI1P60174 286 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 FAM193AP78312 1265 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 SIM1P81133 766 aaPredicted RBP7.14□□□□□ -1.27
YBX3-206ENST00000536823 ZBED6P86452 979 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 CCDC15Q0P6D6 951 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 POLD3Q15054 466 aaPredicted RBP7.14□□□□□ -1.27
YBX3-206ENST00000536823 SKOR2Q2VWA4 1001 aaPredicted RBP7.14□□□□□ -1.27
YBX3-206ENST00000536823 KCNT1Q5JUK3 1230 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 TBC1D3GQ6DHY5 549 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 TBC1D3CQ6IPX1 549 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 NAPEPLDQ6IQ20 393 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 CYP4V2Q6ZWL3 525 aaPredicted RBP7.14□□□□□ -1.27
YBX3-206ENST00000536823 ERN2Q76MJ5 926 aaKnown RBP7.14□□□□□ -1.27
YBX3-206ENST00000536823 TBC1D3Q8IZP1 549 aaPredicted RBP7.14□□□□□ -1.27
YBX3-206ENST00000536823 FBXO27Q8NI29 283 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 SYN2Q92777 582 aaPredicted RBP7.14□□□□□ -1.27
YBX3-206ENST00000536823 NKD1Q969G9 470 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 SKA1Q96BD8 255 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 CCDC120Q96HB5 630 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 PPP1R16AQ96I34 528 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 SERAC1Q96JX3 654 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 CAMK1GQ96NX5 476 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 KCNC2Q96PR1 638 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 PEBP4Q96S96 227 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 EIF3CQ99613 913 aaKnown RBP7.14□□□□□ -1.27
YBX3-206ENST00000536823 HEPHQ9BQS7 1158 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 SNRNP25Q9BV90 132 aaKnown RBP7.14□□□□□ -1.27
YBX3-206ENST00000536823 HDAC8Q9BY41 377 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 TM6SF2Q9BZW4 377 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 ISCUQ9H1K1 167 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 TMPRSS5Q9H3S3 457 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 NOL6Q9H6R4 1146 aaKnown RBP7.14□□□□□ -1.27
YBX3-206ENST00000536823 CATSPERBQ9H7T0 1116 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 AASDHPPTQ9NRN7 309 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 TM7SF3Q9NS93 570 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 GPATCH2LQ9NWQ4 482 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 IFNKQ9P0W0 207 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 CNOT8Q9UFF9 292 aaKnown RBP7.14□□□□□ -1.27
YBX3-206ENST00000536823 IL36AQ9UHA7 158 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 HPCAL4Q9UM19 191 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 WASF3Q9UPY6 502 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 DMTF1Q9Y222 760 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 ACTL7AQ9Y615 435 aa7.14□□□□□ -1.27
YBX3-206ENST00000536823 BZW2Q9Y6E2 419 aaKnown RBP7.14□□□□□ -1.27
YBX3-206ENST00000536823 ASPMQ8IZT6 3477 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 A0A1B0GTQ1 180 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 RASA4BC9J798 803 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 RNF103O00237 685 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 WNT9AO14904 365 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 YKT6O15498 198 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 RASA4O43374 803 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 KDELR3O43731 214 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 AP1G1O43747 822 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 PCDHGA12O60330 932 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 DFNA5O60443 496 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 CBFA2T3O75081 653 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms