RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 CCDC173Q0VFZ6 552 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 ARHGEF7Q14155 803 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 TBC1D25Q3MII6 688 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 C3orf38Q5JPI3 329 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 RALGPS1Q5JS13 557 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 TIGD7Q6NT04 549 aaPredicted RBP14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 LVRNQ6Q4G3 990 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 USP45Q70EL2 814 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 TAF8Q7Z7C8 310 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 TSPAN33Q86UF1 283 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 TPCN2Q8NHX9 752 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 SLC35G2Q8TBE7 412 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 SPOCK2Q92563 424 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 CCDC74AQ96AQ1 378 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 ATXN7L3BQ96GX2 97 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 NAF1Q96HR8 494 aaKnown RBP14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 CCDC42Q96M95 316 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 SMIM14Q96QK8 99 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 RBM15Q96T37 977 aaKnown RBP eCLIP14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 CHP1Q99653 195 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 TMEM168Q9H0V1 697 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 RBM22Q9NW64 420 aaKnown RBP eCLIP14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 DGKBQ9Y6T7 804 aa14.3□□□□□ -0.12
RTN3P1-201ENST00000536295 LRP4O75096 1905 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 MATN3O15232 486 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 MFAP3LO75121 409 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 MYCLP1P12525 358 aaPredicted RBP14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 EPHB1P54762 984 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 SPIDRQ14159 915 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 IFI16Q16666 785 aaKnown RBP14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 RAET1GQ6H3X3 334 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 FOXR1Q6PIV2 292 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 Q6ZVL8 140 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 HEATR4Q86WZ0 1026 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 SDR16C5Q8N3Y7 309 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 PQLC3Q8N755 202 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 CCNYQ8ND76 341 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 FAM46DQ8NEK8 389 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 CCL4L1Q8NHW4 92 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 SNIP1Q8TAD8 396 aaKnown RBP14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 PIH1D2Q8WWB5 315 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 RAPGEF5Q92565 580 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 MAML1Q92585 1016 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 DTD2Q96FN9 168 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 SCRN2Q96FV2 425 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 NHEJ1Q9H9Q4 299 aaPredicted RBP14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 POLR1BQ9H9Y6 1135 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 PHPT1Q9NRX4 125 aaPredicted RBP14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 CD84Q9UIB8 345 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 LCMT1Q9UIC8 334 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 RABGEF1Q9UJ41 708 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 SATB2Q9UPW6 733 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 ENTPD2Q9Y5L3 495 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 ITPR1Q14643 2758 aa14.29□□□□□ -0.12
RTN3P1-201ENST00000536295 PRSS38A1L453 326 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 LRRD1A4D1F6 860 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 B4DGG1 531 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 PDE2AO00408 941 aaPredicted RBP14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 TNFRSF10CO14798 259 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 TCEA3O75764 348 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 HLA-DQB2P05538 268 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 HOXC4P09017 264 aaPredicted RBP14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 KRT10P13645 584 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 CCNB1P14635 433 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 KDELR1P24390 212 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 CCNCP24863 283 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 MAN1A1P33908 653 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 LSSP48449 732 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 SLC10A2Q12908 348 aaPredicted RBP14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 LRRC66Q68CR7 880 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 RFLNAQ6ZTI6 216 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 SFTPA2Q8IWL1 248 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 LSMEM2Q8N112 164 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 NDUFAF2Q8N183 169 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 NBEAQ8NFP9 2946 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 FAF2Q96CS3 445 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 MCCC1Q96RQ3 725 aaPredicted RBP14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 LGMNQ99538 433 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 ASXL3Q9C0F0 2248 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 DPEP2Q9H4A9 486 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 CARS2Q9HA77 564 aaKnown RBP14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 CHKBQ9Y259 395 aa14.28□□□□□ -0.12
RTN3P1-201ENST00000536295 A0A1W2PNU3 283 aaPredicted RBP14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 PMS2P1A4D2B8 440 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 PSMD11O00231 422 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 FZD6O60353 706 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 RPLP0P05388 317 aaKnown RBP14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 TNNT1P13805 278 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 MX2P20592 715 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 GNPDA1P46926 289 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 PCBP4P57723 403 aaKnown RBP14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 CCL7P80098 99 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 CDK3Q00526 305 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 IHHQ14623 411 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 FAM182AQ5T1J6 154 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 DOK6Q6PKX4 331 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 CCDC13Q8IYE1 715 aa14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 CBARPQ8N350 705 aaPredicted RBP14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 Q8N9G6 341 aaPredicted RBP14.27□□□□□ -0.13
RTN3P1-201ENST00000536295 WDR48Q8TAF3 677 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms