RNA–Protein interactions for RNA: ENST00000536144.1

MRE11-206, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 3

Gene MRE11, Length 619 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-206ENST00000536144 ZSWIM9Q86XI8 627 aa9.05□□□□□ -0.96
MRE11-206ENST00000536144 SLC13A5Q86YT5 568 aaPredicted RBP9.05□□□□□ -0.96
MRE11-206ENST00000536144 CDKL3Q8IVW4 592 aaPredicted RBP9.05□□□□□ -0.96
MRE11-206ENST00000536144 NDUFAF2Q8N183 169 aa9.05□□□□□ -0.96
MRE11-206ENST00000536144 SNX19Q92543 992 aa9.05□□□□□ -0.96
MRE11-206ENST00000536144 TADA1Q96BN2 335 aa9.05□□□□□ -0.96
MRE11-206ENST00000536144 IMP4Q96G21 291 aaKnown RBP9.05□□□□□ -0.96
MRE11-206ENST00000536144 AGAP3Q96P47 875 aa9.05□□□□□ -0.96
MRE11-206ENST00000536144 LENG8Q96PV6 779 aaPredicted RBP9.05□□□□□ -0.96
MRE11-206ENST00000536144 NUSAP1Q9BXS6 441 aaKnown RBP9.05□□□□□ -0.96
MRE11-206ENST00000536144 SLC17A9Q9BYT1 436 aa9.05□□□□□ -0.96
MRE11-206ENST00000536144 ZDHHC5Q9C0B5 715 aa9.05□□□□□ -0.96
MRE11-206ENST00000536144 MIR1-1HGQ9H1L0 117 aa9.05□□□□□ -0.96
MRE11-206ENST00000536144 SLC25A51Q9H1U9 297 aa9.05□□□□□ -0.96
MRE11-206ENST00000536144 EBF2Q9HAK2 575 aa9.05□□□□□ -0.96
MRE11-206ENST00000536144 USP29Q9HBJ7 922 aa9.05□□□□□ -0.96
MRE11-206ENST00000536144 GLOD4Q9HC38 313 aa9.05□□□□□ -0.96
MRE11-206ENST00000536144 TM9SF3Q9HD45 589 aa9.05□□□□□ -0.96
MRE11-206ENST00000536144 PCDH12Q9NPG4 1184 aa9.05□□□□□ -0.96
MRE11-206ENST00000536144 KCND1Q9NSA2 647 aa9.05□□□□□ -0.96
MRE11-206ENST00000536144 TRMT1Q9NXH9 659 aaKnown RBP9.05□□□□□ -0.96
MRE11-206ENST00000536144 SEPT10Q9P0V9 454 aa9.05□□□□□ -0.96
MRE11-206ENST00000536144 ZFR2Q9UPR6 939 aaKnown RBP9.05□□□□□ -0.96
MRE11-206ENST00000536144 RAI2Q9Y5P3 530 aa9.05□□□□□ -0.96
MRE11-206ENST00000536144 ZNF292O60281 2723 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 NYNRINQ9P2P1 1898 aaKnown RBP9.04□□□□□ -0.96
MRE11-206ENST00000536144 ABCA7Q8IZY2 2146 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 RIF1Q5UIP0 2472 aaKnown RBP9.04□□□□□ -0.96
MRE11-206ENST00000536144 PATE3B3GLJ2 98 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 PRAMEF26H0Y7S4 382 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 PRLP01236 227 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 SYPP08247 313 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 MMP2P08253 660 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 RBL1P28749 1068 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 CD68P34810 354 aaPredicted RBP9.04□□□□□ -0.96
MRE11-206ENST00000536144 MMP12P39900 470 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 IDH3AP50213 366 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 ARHGAP8P85298 464 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 DSC2Q02487 901 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 LMNB2Q03252 620 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 SGCGQ13326 291 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 CCDC6Q16204 474 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 ZNF569Q5MCW4 686 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 COX20Q5RI15 118 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 SEL1L3Q68CR1 1132 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 NAPEPLDQ6IQ20 393 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 DARS2Q6PI48 645 aaKnown RBP9.04□□□□□ -0.96
MRE11-206ENST00000536144 B4GALNT4Q76KP1 1039 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 IQCHQ86VS3 1027 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 ZCCHC9Q8N567 271 aaKnown RBP9.04□□□□□ -0.96
MRE11-206ENST00000536144 MFSD2AQ8NA29 543 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 C12orf50Q8NA57 414 aaPredicted RBP9.04□□□□□ -0.96
MRE11-206ENST00000536144 TMEM145Q8NBT3 493 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 SLC35B2Q8TB61 432 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 PIH1D2Q8WWB5 315 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 MAIP1Q8WWC4 291 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 SKA1Q96BD8 255 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 SCRN2Q96FV2 425 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 SERAC1Q96JX3 654 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 MCCC1Q96RQ3 725 aaPredicted RBP9.04□□□□□ -0.96
MRE11-206ENST00000536144 TDRD1Q9BXT4 1180 aaKnown RBP9.04□□□□□ -0.96
MRE11-206ENST00000536144 PYCARDQ9ULZ3 195 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 ZKSCAN5Q9Y2L8 839 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 TTLL3Q9Y4R7 772 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 HS3ST3A1Q9Y663 406 aa9.04□□□□□ -0.96
MRE11-206ENST00000536144 EP300Q09472 2414 aaPredicted RBP9.04□□□□□ -0.96
MRE11-206ENST00000536144 ATXN2Q99700 1313 aaKnown RBP9.04□□□□□ -0.96
MRE11-206ENST00000536144 A0A1W2PR77 199 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 TCRBV7S2A1N4TA0A589 114 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 LNP1A1A4G5 178 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 C5orf60A6NFR6 353 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 IGLON5A6NGN9 336 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 USP27XA6NNY8 438 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 VILLO15195 856 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 SLC31A1O15431 190 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 MAGEC1O60732 1142 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 OPHN1O60890 802 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 TM7SF2O76062 418 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 STK10O94804 968 aaKnown RBP9.03□□□□□ -0.96
MRE11-206ENST00000536144 PAK4O96013 591 aaPredicted RBP9.03□□□□□ -0.96
MRE11-206ENST00000536144 CPP00450 1065 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 EPOP01588 193 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 CFIP05156 583 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 PDHA1P08559 390 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 EPB42P16452 691 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 ITIH2P19823 946 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 ALAS2P22557 587 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 HNRNPA2B1P22626 353 aaKnown RBP9.03□□□□□ -0.96
MRE11-206ENST00000536144 CD38P28907 300 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 MAT2AP31153 395 aaKnown RBP9.03□□□□□ -0.96
MRE11-206ENST00000536144 AKT2P31751 481 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 STIP1P31948 543 aaKnown RBP9.03□□□□□ -0.96
MRE11-206ENST00000536144 CD86P42081 329 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 LIMK1P53667 647 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 FAM193AP78312 1265 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 FGL2Q14314 439 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 STAT4Q14765 748 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 SF3A2Q15428 464 aaKnown RBP9.03□□□□□ -0.96
MRE11-206ENST00000536144 LRRC73Q5JTD7 316 aa9.03□□□□□ -0.96
MRE11-206ENST00000536144 C16orf46Q6P387 395 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms