RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 ATPAF2Q8N5M1 289 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 IFI44Q8TCB0 444 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 NSMCE1Q8WV22 266 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 MAML1Q92585 1016 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 BTBD6Q96KE9 485 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 COQ10AQ96MF6 247 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 WDR92Q96MX6 357 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 DEPDC7Q96QD5 511 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 MCCC1Q96RQ3 725 aaPredicted RBP10.83□□□□□ -0.68
CCDC60-202ENST00000535685 RBM15Q96T37 977 aaKnown RBP eCLIP10.83□□□□□ -0.68
CCDC60-202ENST00000535685 ZNF670Q9BS34 389 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 TCEAL2Q9H3H9 227 aaPredicted RBP10.83□□□□□ -0.68
CCDC60-202ENST00000535685 PHTF1Q9UMS5 762 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 SCN8AQ9UQD0 1980 aa10.83□□□□□ -0.68
CCDC60-202ENST00000535685 PDE2AO00408 941 aaPredicted RBP10.82□□□□□ -0.68
CCDC60-202ENST00000535685 MTA2O94776 668 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 KRT7P08729 469 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 TMEM253P0C7T8 217 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 ELFN1P0C7U0 828 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 KELP23276 732 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 EIF2S3P41091 472 aaKnown RBP10.82□□□□□ -0.68
CCDC60-202ENST00000535685 GARSP41250 739 aaKnown RBP10.82□□□□□ -0.68
CCDC60-202ENST00000535685 MMP13P45452 471 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 LSSP48449 732 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 ADKP55263 362 aaKnown RBP10.82□□□□□ -0.68
CCDC60-202ENST00000535685 SRP54P61011 504 aaKnown RBP10.82□□□□□ -0.68
CCDC60-202ENST00000535685 DPYSL3Q14195 570 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 KRT81Q14533 505 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 TIGD7Q6NT04 549 aaPredicted RBP10.82□□□□□ -0.68
CCDC60-202ENST00000535685 PNCKQ6P2M8 343 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 GUSBP11Q6P575 273 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 NLRP8Q86W28 1048 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 GKN2Q86XP6 184 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 MAP7D3Q8IWC1 876 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 SLC35F3Q8IY50 421 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 LSMEM2Q8N112 164 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 DEPDC4Q8N2C3 294 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 OR6C4Q8NGE1 309 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 PCDH19Q8TAB3 1148 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 MAPK15Q8TD08 544 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 SCG3Q8WXD2 468 aaKnown RBP10.82□□□□□ -0.68
CCDC60-202ENST00000535685 FGF11Q92914 225 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 SCRN2Q96FV2 425 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 NOD2Q9HC29 1040 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 B4GALT6Q9UBX8 382 aa10.82□□□□□ -0.68
CCDC60-202ENST00000535685 COL6A6A6NMZ7 2263 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 CACNB4O00305 520 aaPredicted RBP10.81□□□□□ -0.68
CCDC60-202ENST00000535685 NTN3O00634 580 aaPredicted RBP10.81□□□□□ -0.68
CCDC60-202ENST00000535685 MATN3O15232 486 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 TLX3O43711 291 aaPredicted RBP10.81□□□□□ -0.68
CCDC60-202ENST00000535685 FZD6O60353 706 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 HEXIM1O94992 359 aaKnown RBP10.81□□□□□ -0.68
CCDC60-202ENST00000535685 PGLSO95336 258 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 TNFP01375 233 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 PRKCGP05129 697 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 CD48P09326 243 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 CYP2A6P11509 494 aaPredicted RBP10.81□□□□□ -0.68
CCDC60-202ENST00000535685 CCNCP24863 283 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 VIPR1P32241 457 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 ACTN2P35609 894 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 DPTQ07507 201 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 TRAF2Q12933 501 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 MMRN1Q13201 1228 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 C1orf61Q13536 156 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 TCEAL1Q15170 157 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 CNGA3Q16281 694 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 IFI16Q16666 785 aaKnown RBP10.81□□□□□ -0.68
CCDC60-202ENST00000535685 CDKN3Q16667 212 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 ISXQ2M1V0 245 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 TBC1D25Q3MII6 688 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 LINC01559Q495D7 138 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 ANKRD20A8PQ5CZ79 823 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 NCBP2-AS2Q69YL0 99 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 OGFOD3Q6PK18 319 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 ENPP7Q6UWV6 458 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 EFL1Q7Z2Z2 1120 aaKnown RBP10.81□□□□□ -0.68
CCDC60-202ENST00000535685 HID1Q8IV36 788 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 VSTM4Q8IW00 320 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 ARL10Q8N8L6 244 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 PLA2G15Q8NCC3 412 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 OR56A4Q8NGH8 313 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 PIH1D2Q8WWB5 315 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 CTNNBL1Q8WYA6 563 aaPredicted RBP10.81□□□□□ -0.68
CCDC60-202ENST00000535685 TSACCQ96A04 125 aaPredicted RBP10.81□□□□□ -0.68
CCDC60-202ENST00000535685 FUBP1Q96AE4 644 aaKnown RBP10.81□□□□□ -0.68
CCDC60-202ENST00000535685 ZNF578Q96N58 590 aaPredicted RBP10.81□□□□□ -0.68
CCDC60-202ENST00000535685 ABCG4Q9H172 646 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 CTTNBP2NLQ9P2B4 639 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 KLQ9UEF7 1012 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 PADI4Q9UM07 663 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 OR1A2Q9Y585 309 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 PCDHGC4Q9Y5F7 938 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 AK5Q9Y6K8 562 aa10.81□□□□□ -0.68
CCDC60-202ENST00000535685 MGAQ8IWI9 3026 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 CPED1A4D0V7 1026 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 MFSD11O43934 449 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 BRINP1O60477 761 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 CSO75390 466 aaKnown RBP10.8□□□□□ -0.68
CCDC60-202ENST00000535685 CPP00450 1065 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 PCCBP05166 539 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms