RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 OCMP0CE72 109 aaPredicted RBP6.66□□□□□ -1.34
USP28-202ENST00000535607 SMIM18P0DKX4 95 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 CDH2P19022 906 aaPredicted RBP6.66□□□□□ -1.34
USP28-202ENST00000535607 ENPP1P22413 925 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 PROZP22891 400 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 PEX2P28328 305 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 SSTR1P30872 391 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 GJC1P36383 396 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 CPOXP36551 454 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 GARSP41250 739 aaKnown RBP6.66□□□□□ -1.34
USP28-202ENST00000535607 GABRB2P47870 512 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 PRKAA2P54646 552 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 GPX6P59796 221 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 YWHAEP62258 255 aaKnown RBP6.66□□□□□ -1.34
USP28-202ENST00000535607 ARHGAP8P85298 464 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 GTF2BQ00403 316 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 GHRHRQ02643 423 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 SREBF2Q12772 1141 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 MAMLD1Q13495 774 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 APOFQ13790 326 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 CCNIQ14094 377 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 TFDP2Q14188 446 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 COG2Q14746 738 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 OASLQ15646 514 aaKnown RBP6.66□□□□□ -1.34
USP28-202ENST00000535607 FSCN1Q16658 493 aaKnown RBP6.66□□□□□ -1.34
USP28-202ENST00000535607 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.66□□□□□ -1.34
USP28-202ENST00000535607 INSCQ1MX18 579 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 LRRC36Q1X8D7 754 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 ZNF829Q3KNS6 432 aaPredicted RBP6.66□□□□□ -1.34
USP28-202ENST00000535607 PHF19Q5T6S3 580 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 LPCAT4Q643R3 524 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 PLEKHA7Q6IQ23 1121 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 NIPAL1Q6NVV3 410 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 DNAJC24Q6P3W2 148 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 KLHL35Q6PF15 583 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 DLK2Q6UY11 383 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 TIFABQ6ZNK6 161 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 MON1BQ7L1V2 547 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 PRUNE1Q86TP1 453 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 RASAL3Q86YV0 1011 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 CTAGE3PQ8IX95 158 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 DEFB107AQ8IZN7 70 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 LINC00482Q8N8I6 264 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 NIPA2Q8N8Q9 360 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 NAT8LQ8N9F0 302 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 PDPRQ8NCN5 879 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 BHLHE22Q8NFJ8 381 aaPredicted RBP6.66□□□□□ -1.34
USP28-202ENST00000535607 GIPC3Q8TF64 312 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 STON2Q8WXE9 905 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 CRYGNQ8WXF5 182 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 CASP10Q92851 521 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 TOP1MTQ969P6 601 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 EME1Q96AY2 570 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 EFHD2Q96C19 240 aaPredicted RBP6.66□□□□□ -1.34
USP28-202ENST00000535607 CNBD2Q96M20 576 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 CCDC138Q96M89 665 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 PRPF18Q99633 342 aaKnown RBP6.66□□□□□ -1.34
USP28-202ENST00000535607 IMPG2Q9BZV3 1241 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 INO80BQ9C086 356 aaPredicted RBP6.66□□□□□ -1.34
USP28-202ENST00000535607 UNKQ9C0B0 810 aaKnown RBP6.66□□□□□ -1.34
USP28-202ENST00000535607 RBM38Q9H0Z9 239 aaKnown RBP6.66□□□□□ -1.34
USP28-202ENST00000535607 SLC38A10Q9HBR0 1119 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 MAGEE1Q9HCI5 957 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 VTA1Q9NP79 307 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 PFDN4Q9NQP4 134 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 ATAD3AQ9NVI7 634 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 GIN1Q9NXP7 522 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 HOXC10Q9NYD6 342 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 MAP3K20Q9NYL2 800 aaKnown RBP6.66□□□□□ -1.34
USP28-202ENST00000535607 KCMF1Q9P0J7 381 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 PAK5Q9P286 719 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 STK39Q9UEW8 545 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 GNPTGQ9UJJ9 305 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 ADAMTS5Q9UNA0 930 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 FZD1Q9UP38 647 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 AP4B1Q9Y6B7 739 aa6.66□□□□□ -1.34
USP28-202ENST00000535607 ZNF236Q9UL36 1845 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 hCG_1818297A0A087WSY0 165 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 E2F8A0AVK6 867 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 TRIM43BA6NCK2 446 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 KPNA7A9QM74 516 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 SLCO1B7G3V0H7 640 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 VWA5AO00534 786 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 KPNA4O00629 521 aaPredicted RBP6.65□□□□□ -1.34
USP28-202ENST00000535607 TOM1L1O75674 476 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 PSMD10O75832 226 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 STAM2O75886 525 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 PCDH8O95206 1070 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 ALOX5P09917 674 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 MED14OSP0DP75 135 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 ATP6V1B1P15313 513 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 THBS2P35442 1172 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 AP3M2P53677 418 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 MANFP55145 182 aaKnown RBP6.65□□□□□ -1.34
USP28-202ENST00000535607 NRG3P56975 720 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 C21orf59P57076 290 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 ERVK-21P61565 698 aa6.65□□□□□ -1.34
USP28-202ENST00000535607 BASP1P80723 227 aaKnown RBP6.65□□□□□ -1.34
USP28-202ENST00000535607 MSLNQ13421 630 aaPredicted RBP6.65□□□□□ -1.34
USP28-202ENST00000535607 FLOT2Q14254 428 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms